RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 PLCXD3Q63HM9 321 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 ZNF585AQ6P3V2 769 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 MDP1Q86V88 176 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 TCTE3Q8IZS6 198 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 GCNT2Q8N0V5 402 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 OR51T1Q8NGJ9 327 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 NPRL2Q8WTW4 380 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 GAL3ST1Q99999 423 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 SELENOIQ9C0D9 397 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 MED28Q9H204 178 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 NOX3Q9HBY0 568 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 GPN1Q9HCN4 374 aaPredicted RBP14.85□□□□□ -0.03
LTBR-207ENST00000539925 IFT46Q9NQC8 304 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 SCP2D1Q9UJQ7 156 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 PROCRQ9UNN8 238 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 PLEKHA6Q9Y2H5 1048 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 FREM1Q5H8C1 2179 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 CACNA1GO43497 2377 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 PRSS44E7EML9 344 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 AKR7A2O43488 359 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 IL5P05113 134 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 TPOP07202 933 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 MPZP25189 248 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 GK2Q14410 553 aaPredicted RBP14.84□□□□□ -0.03
LTBR-207ENST00000539925 RSU1Q15404 277 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 MOB3CQ70IA8 216 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 FJX1Q86VR8 437 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 TMEM104Q8NE00 496 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 PIGCQ92535 297 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 ST6GAL2Q96JF0 529 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 GHITMQ9H3K2 345 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 NOP16Q9Y3C1 178 aaKnown RBP14.84□□□□□ -0.03
LTBR-207ENST00000539925 CUL9Q8IWT3 2517 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 FAM230AA0A1W2PPH8 454 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 ZNF503-AS2A6NEH8 195 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 DISC1C4P0D8 188 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 H3BUI4 141 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 TIMP3P35625 211 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 GABRA6Q16445 453 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 PLEKHN1Q494U1 663 aaPredicted RBP14.84□□□□□ -0.03
LTBR-207ENST00000539925 CRIP3Q6Q6R5 217 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 BEND4Q6ZU67 534 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 TRAPPC6BQ86SZ2 158 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 C1orf174Q8IYL3 243 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 SAXO1Q8IYX7 474 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 ZNF75AQ96N20 296 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 HIST1H2AAQ96QV6 131 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 OR51J1Q9H342 316 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 ELL3Q9HB65 397 aaPredicted RBP14.84□□□□□ -0.03
LTBR-207ENST00000539925 CDH20Q9HBT6 801 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 MPC1Q9Y5U8 109 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 ARHGAP21Q5T5U3 1957 aa14.84□□□□□ -0.03
LTBR-207ENST00000539925 TNRC6AQ8NDV7 1962 aaKnown RBP14.83□□□□□ -0.04
LTBR-207ENST00000539925 RTTNQ86VV8 2226 aa14.83□□□□□ -0.04
LTBR-207ENST00000539925 A0A0A6YYJ9 748 aa14.83□□□□□ -0.04
LTBR-207ENST00000539925 PDGFAP04085 211 aa14.83□□□□□ -0.04
LTBR-207ENST00000539925 CD3DP04234 171 aa14.83□□□□□ -0.04
LTBR-207ENST00000539925 CBR1P16152 277 aa14.83□□□□□ -0.04
LTBR-207ENST00000539925 ZNF14P17017 642 aaPredicted RBP14.83□□□□□ -0.04
LTBR-207ENST00000539925 CD300CQ08708 224 aa14.83□□□□□ -0.04
LTBR-207ENST00000539925 MAB21L1Q13394 359 aa14.83□□□□□ -0.04
LTBR-207ENST00000539925 ZFP69Q49AA0 526 aa14.83□□□□□ -0.04
LTBR-207ENST00000539925 ATAD3CQ5T2N8 411 aa14.83□□□□□ -0.04
LTBR-207ENST00000539925 C1orf185Q5T7R7 199 aa14.83□□□□□ -0.04
LTBR-207ENST00000539925 FAM169BQ8N8A8 192 aa14.83□□□□□ -0.04
LTBR-207ENST00000539925 OR56B2PQ8NGI1 322 aa14.83□□□□□ -0.04
LTBR-207ENST00000539925 GIMAP1Q8WWP7 306 aa14.83□□□□□ -0.04
LTBR-207ENST00000539925 PRRT1Q99946 306 aa14.83□□□□□ -0.04
LTBR-207ENST00000539925 BANF2Q9H503 90 aa14.83□□□□□ -0.04
LTBR-207ENST00000539925 NPDC1Q9NQX5 325 aaPredicted RBP14.83□□□□□ -0.04
LTBR-207ENST00000539925 SLC2A8Q9NY64 477 aa14.83□□□□□ -0.04
LTBR-207ENST00000539925 ANAPC10Q9UM13 185 aa14.83□□□□□ -0.04
LTBR-207ENST00000539925 MED12LQ86YW9 2145 aa14.83□□□□□ -0.04
LTBR-207ENST00000539925 ANKRD30BLA7E2S9 258 aa14.82□□□□□ -0.04
LTBR-207ENST00000539925 SNRPGP15A8MWD9 76 aa14.82□□□□□ -0.04
LTBR-207ENST00000539925 MFNGO00587 321 aa14.82□□□□□ -0.04
LTBR-207ENST00000539925 TPD52L2O43399 206 aaKnown RBP14.82□□□□□ -0.04
LTBR-207ENST00000539925 IL2RAP01589 272 aa14.82□□□□□ -0.04
LTBR-207ENST00000539925 SERPINA2P20848 420 aa14.82□□□□□ -0.04
LTBR-207ENST00000539925 CEACAM21Q3KPI0 293 aa14.82□□□□□ -0.04
LTBR-207ENST00000539925 LINC00303Q3SY05 128 aa14.82□□□□□ -0.04
LTBR-207ENST00000539925 RNASE10Q5GAN6 216 aaKnown RBP14.82□□□□□ -0.04
LTBR-207ENST00000539925 ZDHHC23Q8IYP9 409 aa14.82□□□□□ -0.04
LTBR-207ENST00000539925 OR5D18Q8NGL1 313 aa14.82□□□□□ -0.04
LTBR-207ENST00000539925 CCDC107Q8WV48 283 aa14.82□□□□□ -0.04
LTBR-207ENST00000539925 OCSTAMPQ9BR26 566 aa14.82□□□□□ -0.04
LTBR-207ENST00000539925 PAPOLGQ9BWT3 736 aaKnown RBP14.82□□□□□ -0.04
LTBR-207ENST00000539925 ALX4Q9H161 411 aaPredicted RBP14.82□□□□□ -0.04
LTBR-207ENST00000539925 NKIRAS2Q9NYR9 191 aa14.82□□□□□ -0.04
LTBR-207ENST00000539925 STARD10Q9Y365 291 aa14.82□□□□□ -0.04
LTBR-207ENST00000539925 CD300LBA8K4G0 201 aa14.81□□□□□ -0.04
LTBR-207ENST00000539925 RAD51DO75771 328 aa14.81□□□□□ -0.04
LTBR-207ENST00000539925 GNB3P16520 340 aa14.81□□□□□ -0.04
LTBR-207ENST00000539925 SELEP16581 610 aa14.81□□□□□ -0.04
LTBR-207ENST00000539925 NAT1P18440 290 aa14.81□□□□□ -0.04
LTBR-207ENST00000539925 SPINK2P20155 84 aa14.81□□□□□ -0.04
LTBR-207ENST00000539925 BLVRBP30043 206 aaPredicted RBP14.81□□□□□ -0.04
LTBR-207ENST00000539925 TMPRSS3P57727 454 aa14.81□□□□□ -0.04
LTBR-207ENST00000539925 PDZK1IP1Q13113 114 aa14.81□□□□□ -0.04
LTBR-207ENST00000539925 TMEM255AQ5JRV8 349 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms