RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 LSM2Q9Y333 95 aaKnown RBP10.71□□□□□ -0.69
TSPAN9-207ENST00000539631 WIPI2Q9Y4P8 454 aa10.71□□□□□ -0.69
TSPAN9-207ENST00000539631 NPTNQ9Y639 398 aa10.71□□□□□ -0.69
TSPAN9-207ENST00000539631 ITPR3Q14573 2671 aa10.71□□□□□ -0.7
TSPAN9-207ENST00000539631 LRP5LA4QPB2 252 aa10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 ANKRD61A6NGH8 418 aa10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 IFNL4K9M1U5 179 aa10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 ZNF20P17024 532 aa10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 MAP2K4P45985 399 aa10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 TAS2R43P59537 309 aa10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 GABARAPL2P60520 117 aa10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 GNG3P63215 75 aa10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 HOXA4Q00056 320 aaPredicted RBP10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 LOXL1Q08397 574 aaPredicted RBP10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 MED22Q15528 200 aa10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 UBE2V2Q15819 145 aa10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 ZNF181Q2M3W8 571 aa10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 FAM201AQ5SY85 155 aa10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 OR5A2Q8NGI9 324 aa10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 OR11L1Q8NGX0 322 aa10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 Q8TCH9 128 aa10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 TSEN15Q8WW01 171 aaKnown RBP10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 RPL3LQ92901 407 aaKnown RBP10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 RAB1CQ92928 201 aa10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 C10orf35Q96D05 121 aa10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 TIMD4Q96H15 378 aa10.7□□□□□ -0.7
TSPAN9-207ENST00000539631 hCG_1807616A0A1W2PRN6 198 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 OR5B21A6NL26 309 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 TMEM210A6NLX4 147 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 CDIPTO14735 213 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 ZNF205O95201 554 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 IGHV2-70P01814 119 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 RPSAP08865 295 aaKnown RBP10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 INHBBP09529 407 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 IRF2P14316 349 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 CELP19835 753 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 SOX2P48431 317 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 ACSM1Q08AH1 577 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 SPHARQ15513 63 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 FAM76BQ5HYJ3 339 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 PEG10Q86TG7 708 aaKnown RBP10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 SCCPDHQ8NBX0 429 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 C19orf18Q8NEA5 215 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 OR13C5Q8NGS8 318 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 CLDND2Q8NHS1 167 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 TRMT10AQ8TBZ6 339 aaKnown RBP10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 NPRL2Q8WTW4 380 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 GHSRQ92847 366 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 HPS1Q92902 700 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 PGLYRP3Q96LB9 341 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 YTHDF1Q9BYJ9 559 aaKnown RBP10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 CHST5Q9GZS9 411 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 TLNRD1Q9H1K6 362 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 METTL17Q9H7H0 456 aaPredicted RBP10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 RNF7Q9UBF6 113 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 DHDHQ9UQ10 334 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 ZNF281Q9Y2X9 895 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 LRRC42Q9Y546 428 aa10.69□□□□□ -0.7
TSPAN9-207ENST00000539631 FAM230AA0A1W2PPH8 454 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 PQLC2LA1A4F0 135 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 ISPDA4D126 451 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 LRRC30A6NM36 301 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 PLPP2O43688 288 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 GATBO75879 557 aaKnown RBP10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 SERPINA3P01011 423 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 EGR1P18146 543 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 ATF1P18846 271 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 IL2RGP31785 369 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 CD80P33681 288 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 CHN2P52757 468 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 BTG1P62324 171 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 BDH1Q02338 343 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 ZMYND11Q15326 602 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 WDR82Q6UXN9 313 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 C1orf87Q8N0U7 546 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 GCSAMQ8N6F7 178 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 BOLLQ8N9W6 283 aaKnown RBP10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 GPR148Q8TDV2 347 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 PP6455Q8WZ26 134 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 SMR3AQ99954 134 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 OR51I2Q9H344 312 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 SLC7A11Q9UPY5 501 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 CCDC168Q8NDH2 2452 aa10.68□□□□□ -0.7
TSPAN9-207ENST00000539631 PPIAL4EA0A075B759 164 aa10.67□□□□□ -0.7
TSPAN9-207ENST00000539631 IGKV1-9A0A0C4DH69 117 aa10.67□□□□□ -0.7
TSPAN9-207ENST00000539631 TRBV5-5A0A0J9YX44 114 aa10.67□□□□□ -0.7
TSPAN9-207ENST00000539631 PPIAL4DF5H284 164 aa10.67□□□□□ -0.7
TSPAN9-207ENST00000539631 C3orf80F5H4A9 247 aa10.67□□□□□ -0.7
TSPAN9-207ENST00000539631 MRPS14O60783 128 aaKnown RBP10.67□□□□□ -0.7
TSPAN9-207ENST00000539631 CD1AP06126 327 aa10.67□□□□□ -0.7
TSPAN9-207ENST00000539631 PPIAL4FP0DN26 164 aa10.67□□□□□ -0.7
TSPAN9-207ENST00000539631 FOSL1P15407 271 aa10.67□□□□□ -0.7
TSPAN9-207ENST00000539631 RPS11P62280 158 aaKnown RBP eCLIP10.67□□□□□ -0.7
TSPAN9-207ENST00000539631 CNN3Q15417 329 aaKnown RBP10.67□□□□□ -0.7
TSPAN9-207ENST00000539631 YIF1BQ5BJH7 314 aa10.67□□□□□ -0.7
TSPAN9-207ENST00000539631 HAGHLQ6PII5 290 aaPredicted RBP10.67□□□□□ -0.7
TSPAN9-207ENST00000539631 UTS2BQ765I0 119 aa10.67□□□□□ -0.7
TSPAN9-207ENST00000539631 LRRC28Q86X40 367 aaPredicted RBP10.67□□□□□ -0.7
TSPAN9-207ENST00000539631 PARP16Q8N5Y8 322 aa10.67□□□□□ -0.7
TSPAN9-207ENST00000539631 OR13C9Q8NGT0 318 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms