RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 KIAA1456Q9P272 454 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 TRAPPC1Q9Y5R8 145 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 WSB1Q9Y6I7 421 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 MGAMO43451 1857 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 A0A1W2PQU0 124 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 RNF212BA8MTL3 300 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 HSPB6O14558 160 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 NID1P14543 1247 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 ZBTB25P24278 435 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 LY6G6FQ5SQ64 297 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 HEPN1Q6WQI6 88 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 OR51E1Q8TCB6 317 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 FBXL17Q9UF56 701 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 ARL2-SNX15V9GYD0 113 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 TRAV14DV4A0A0A6YYC5 116 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 MARCH11A6NNE9 402 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 SFT2D2O95562 160 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 GPR75O95800 540 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 RAC2P15153 192 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 PAX1P15863 534 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 DLX2Q07687 328 aaPredicted RBP4.84□□□□□ -1.63
PTPRD-213ENST00000537002 C1orf61Q13536 156 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 NKAIN1Q4KMZ8 207 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 OR8G2PQ6IF36 304 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 ABHD17CQ6PCB6 329 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 GNPNAT1Q96EK6 184 aaPredicted RBP4.84□□□□□ -1.63
PTPRD-213ENST00000537002 ADOQ96SZ5 270 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 NUDT9Q9BW91 350 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 ARV1Q9H2C2 271 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 C20orf141Q9NUB4 165 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 CKAP5Q14008 2032 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 MCM3APO60318 1980 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 TRBV5-5A0A0J9YX44 114 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 MSX1P28360 303 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 SLC6A8P48029 635 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 TMPRSS7Q7RTY8 843 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 ANKRD33Q7Z3H0 272 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 GKN2Q86XP6 184 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 MAML2Q8IZL2 1156 aaPredicted RBP4.84□□□□□ -1.63
PTPRD-213ENST00000537002 CHST6Q9GZX3 395 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 WNT5BQ9H1J7 359 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 PRDM13Q9H4Q3 707 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 KCNIP1Q9NZI2 227 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 MTCH1Q9NZJ7 389 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 HSF4Q9ULV5 492 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 PAPPA2Q9BXP8 1791 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 RPL36A-HNRNPH2H7BZ11 118 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 ALOX12BO75342 701 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 GPANK1O95872 356 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF43P17038 809 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 BCKDHBP21953 392 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 TNFSF10P50591 281 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 LSM11P83369 360 aaKnown RBP eCLIP4.84□□□□□ -1.63
PTPRD-213ENST00000537002 PRDX1Q06830 199 aaKnown RBP4.84□□□□□ -1.63
PTPRD-213ENST00000537002 OR8G1Q15617 311 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 PYY3Q5JQD4 70 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 FCRL6Q6DN72 434 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 DHRS11Q6UWP2 260 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 MSL2Q9HCI7 577 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 HCSTQ9UBK5 93 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 RPH3ALQ9UNE2 315 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 PPIHO43447 177 aaKnown RBP4.84□□□□□ -1.64
PTPRD-213ENST00000537002 KITLGP21583 273 aa4.84□□□□□ -1.64
PTPRD-213ENST00000537002 BSGP35613 385 aa4.84□□□□□ -1.64
PTPRD-213ENST00000537002 CD200P41217 278 aa4.84□□□□□ -1.64
PTPRD-213ENST00000537002 MTCP1P56278 107 aa4.84□□□□□ -1.64
PTPRD-213ENST00000537002 HIST1H3AP68431 136 aa4.84□□□□□ -1.64
PTPRD-213ENST00000537002 HBG1P69891 147 aa4.84□□□□□ -1.64
PTPRD-213ENST00000537002 HBG2P69892 147 aa4.84□□□□□ -1.64
PTPRD-213ENST00000537002 HLA-DRB3P79483 266 aa4.84□□□□□ -1.64
PTPRD-213ENST00000537002 TMEM241Q24JQ0 296 aa4.84□□□□□ -1.64
PTPRD-213ENST00000537002 GPR34Q9UPC5 381 aa4.84□□□□□ -1.64
PTPRD-213ENST00000537002 RNF24Q9Y225 148 aa4.84□□□□□ -1.64
PTPRD-213ENST00000537002 A0A1W2PR48 441 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 FAM221AA4D161 298 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 ADH1BP00325 375 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 KLKB1P03952 638 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 HNRNPA1P09651 372 aaKnown RBP eCLIP4.83□□□□□ -1.64
PTPRD-213ENST00000537002 FAM157CP0CG43 387 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 ADRA2CP18825 462 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 HNRNPA2B1P22626 353 aaKnown RBP4.83□□□□□ -1.64
PTPRD-213ENST00000537002 GALR1P47211 349 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 EMDP50402 254 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 TMEM183BQ1AE95 376 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 DMRTC1Q5HYR2 192 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 FAM69BQ5VUD6 431 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 TGIF2LYQ8IUE0 185 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 DDA1Q9BW61 102 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 VN1R3Q9BXE9 311 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 GSX1Q9H4S2 264 aaPredicted RBP4.83□□□□□ -1.64
PTPRD-213ENST00000537002 TK1P04183 234 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 CT45A8P0DMV1 189 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 CT45A9P0DMV2 189 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 OR1D4P47884 311 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 CSNK1G2P78368 415 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 DUSP8Q13202 625 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 OR5I1Q13606 314 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 CT45A2Q5DJT8 189 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 FDX2Q6P4F2 183 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 TMEM183AQ8IXX5 376 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms