RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 OR2AT4A6NND4 320 aa10.58□□□□□ -0.72
TNFRSF1A-207ENST00000535958 ARPC2O15144 300 aa10.58□□□□□ -0.72
TNFRSF1A-207ENST00000535958 FBXO24O75426 580 aa10.58□□□□□ -0.72
TNFRSF1A-207ENST00000535958 SASH3O75995 380 aa10.58□□□□□ -0.72
TNFRSF1A-207ENST00000535958 CCNB2O95067 398 aa10.58□□□□□ -0.72
TNFRSF1A-207ENST00000535958 HSP90B2PQ58FF3 399 aa10.58□□□□□ -0.72
TNFRSF1A-207ENST00000535958 Q6ZPA2 131 aa10.58□□□□□ -0.72
TNFRSF1A-207ENST00000535958 ANGPTL6Q8NI99 470 aa10.58□□□□□ -0.72
TNFRSF1A-207ENST00000535958 RNF133Q8WVZ7 376 aa10.58□□□□□ -0.72
TNFRSF1A-207ENST00000535958 RORBQ92753 470 aa10.58□□□□□ -0.72
TNFRSF1A-207ENST00000535958 ABHD6Q9BV23 337 aa10.58□□□□□ -0.72
TNFRSF1A-207ENST00000535958 IL20Q9NYY1 176 aa10.58□□□□□ -0.72
TNFRSF1A-207ENST00000535958 SOX14O95416 240 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 ACAA1P09110 424 aaPredicted RBP10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 CLUP10909 449 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 AMY2BP19961 511 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 PRDX6P30041 224 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 GSTT1P30711 240 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 LOXL3P58215 753 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 MXRA7P84157 204 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 EMX1Q04741 257 aaPredicted RBP10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 AANATQ16613 207 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 COMMD2Q86X83 199 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 LYG1Q8N1E2 194 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 AQP11Q8NBQ7 271 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 OR4F17Q8NGA8 305 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 OR8D4Q8NGM9 314 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 PPP1R35Q8TAP8 253 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 TEX47Q8TBZ9 253 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 OR5P3Q8WZ94 311 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 CFHR4Q92496 578 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 R3HDM4Q96D70 268 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 OR4F4Q96R69 305 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 DDOQ99489 341 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 BTBD10Q9BSF8 475 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 CCDC134Q9H6E4 229 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 PPP1R3EQ9H7J1 279 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 HEXA-AS1Q9H8Q6 139 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 ELL3Q9HB65 397 aaPredicted RBP10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 ABCB10Q9NRK6 738 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 ARMC1Q9NVT9 282 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 NECAP2Q9NVZ3 263 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 LYVE1Q9Y5Y7 322 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 PLXNB1O43157 2135 aa10.57□□□□□ -0.72
TNFRSF1A-207ENST00000535958 SLC1A7O00341 560 aa10.56□□□□□ -0.72
TNFRSF1A-207ENST00000535958 CST4P01036 141 aa10.56□□□□□ -0.72
TNFRSF1A-207ENST00000535958 GASTP01350 101 aa10.56□□□□□ -0.72
TNFRSF1A-207ENST00000535958 TFF1P04155 84 aa10.56□□□□□ -0.72
TNFRSF1A-207ENST00000535958 LYNP07948 512 aa10.56□□□□□ -0.72
TNFRSF1A-207ENST00000535958 HSD17B1P14061 328 aa10.56□□□□□ -0.72
TNFRSF1A-207ENST00000535958 H2AFXP16104 143 aaPredicted RBP10.56□□□□□ -0.72
TNFRSF1A-207ENST00000535958 COX7A1P24310 79 aa10.56□□□□□ -0.72
TNFRSF1A-207ENST00000535958 GPM6AP51674 278 aa10.56□□□□□ -0.72
TNFRSF1A-207ENST00000535958 BMXP51813 675 aa10.56□□□□□ -0.72
TNFRSF1A-207ENST00000535958 ZNRF1Q8ND25 227 aa10.56□□□□□ -0.72
TNFRSF1A-207ENST00000535958 ZNF671Q8TAW3 534 aa10.56□□□□□ -0.72
TNFRSF1A-207ENST00000535958 THEM6Q8WUY1 208 aa10.56□□□□□ -0.72
TNFRSF1A-207ENST00000535958 NMNAT2Q9BZQ4 307 aa10.56□□□□□ -0.72
TNFRSF1A-207ENST00000535958 MEGF9Q9H1U4 602 aa10.56□□□□□ -0.72
TNFRSF1A-207ENST00000535958 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.56□□□□□ -0.72
TNFRSF1A-207ENST00000535958 H3BN98 237 aa10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 MSX2P35548 267 aaPredicted RBP10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 OPRL1P41146 370 aa10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 ERVFRD-1P60508 538 aa10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 GNG3P63215 75 aa10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 SMIM21Q3B7S5 101 aa10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 KLHL12Q53G59 568 aa10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 PLA1AQ53H76 456 aa10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 OXLD1Q5BKU9 147 aa10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 THAP5Q7Z6K1 395 aa10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 MKXQ8IYA7 352 aa10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 PGAM4Q8N0Y7 254 aa10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 OR4Q3Q8NH05 313 aa10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 C17orf50Q8WW18 174 aa10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 C1orf21Q9H246 121 aa10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 OR51V1Q9H2C8 321 aa10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 REEP1Q9H902 201 aa10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 CMC2Q9NRP2 79 aa10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 NDE1Q9NXR1 346 aa10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 USE1Q9NZ43 259 aa10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 PITPNC1Q9UKF7 332 aa10.55□□□□□ -0.72
TNFRSF1A-207ENST00000535958 FAM183AA6NL82 134 aa10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 ZNF732B4DXR9 585 aa10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 ALDOBP05062 364 aa10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 PSG2P11465 335 aa10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 ACKR3P25106 362 aa10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 MAP2K3P46734 347 aa10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 PSMA6P60900 246 aaKnown RBP10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 RPL31P62899 125 aaKnown RBP10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 CEP78Q5JTW2 689 aa10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 ZBTB37Q5TC79 503 aa10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 C16orf89Q6UX73 402 aa10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 PRSS45Q7RTY3 260 aa10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 NDUFA11Q86Y39 141 aa10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 ZNF454Q8N9F8 522 aa10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 OR5K1Q8NHB7 308 aa10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 HPSE2Q8WWQ2 592 aa10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 FOXRED1Q96CU9 486 aaPredicted RBP10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 CDRT15Q96T59 188 aa10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 NIPAL2Q9H841 368 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms