RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 C10orf53Q8N6V4 93 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 ZNF615Q8N8J6 731 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 BMPERQ8N8U9 685 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 ZNF383Q8NA42 475 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 SUMF2Q8NBJ7 301 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 OR8G5Q8NG78 346 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 OR9A4Q8NGU2 314 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 OR5R1Q8NH85 324 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 CD300LFQ8TDQ1 290 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 RGP1Q92546 391 aaPredicted RBP5.81□□□□□ -1.48
USP28-202ENST00000535607 SLAMF9Q96A28 289 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 SLC25A28Q96A46 364 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 AKR1E2Q96JD6 320 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 C4orf45Q96LM5 186 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 NMNAT3Q96T66 252 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 SLC6A7Q99884 636 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 WDR77Q9BQA1 342 aaPredicted RBP5.81□□□□□ -1.48
USP28-202ENST00000535607 C2orf88Q9BSF0 95 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 CHST5Q9GZS9 411 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 SLC5A7Q9GZV3 580 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 TMEM231Q9H6L2 316 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 FN3KRPQ9HA64 309 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 OR2S2Q9NQN1 319 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 CYTL1Q9NRR1 136 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 UBQLN4Q9NRR5 601 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 CUTCQ9NTM9 273 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 MRM2Q9UI43 246 aaKnown RBP5.81□□□□□ -1.48
USP28-202ENST00000535607 HHLA2Q9UM44 414 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 VSIG4Q9Y279 399 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 STARD10Q9Y365 291 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 FAM96BQ9Y3D0 163 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 OR1A2Q9Y585 309 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 FLVCR1Q9Y5Y0 555 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 NUP210LQ5VU65 1888 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 MUC3AQ02505 3323 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 TRAV8-7A0A075B6U6 113 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 A0A087WUJ7 227 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 A0A087X0M5 115 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 A0A1B0GX30 115 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 A0A1W2PPH5 198 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 A0A1W2PPV9 198 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 A0A1W2PQF6 199 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 SMCO3A2RU48 225 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 CPED1A4D0V7 1026 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 A6NLC8 198 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 UMAD1C9J7I0 102 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 KLF8O95600 359 aaPredicted RBP5.8□□□□□ -1.48
USP28-202ENST00000535607 PTBP3O95758 552 aaKnown RBP5.8□□□□□ -1.48
USP28-202ENST00000535607 IGLV3-19P01714 112 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 CRYABP02511 175 aaKnown RBP5.8□□□□□ -1.48
USP28-202ENST00000535607 PRH1P02810 166 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 TMIGD3P0DMS9 266 aaPredicted RBP5.8□□□□□ -1.48
USP28-202ENST00000535607 PTHLHP12272 177 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 CSRP1P21291 193 aaKnown RBP5.8□□□□□ -1.48
USP28-202ENST00000535607 ACKR3P25106 362 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 AVPR2P30518 371 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 RPS10P46783 165 aaKnown RBP5.8□□□□□ -1.48
USP28-202ENST00000535607 SULT1A1P50225 295 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 NDUFA6P56556 154 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 SLC26A5P58743 744 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 TAS2R46P59540 309 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 RPS15P62841 145 aaKnown RBP5.8□□□□□ -1.48
USP28-202ENST00000535607 GPR18Q14330 331 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 CLINT1Q14677 625 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 GUK1Q16774 197 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 ALG10Q5BKT4 473 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 SOHLH1Q5JUK2 328 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 VAX1Q5SQQ9 334 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 C1orf100Q5SVJ3 147 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 GLYATL3Q5SZD4 288 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 AKR1C8PQ5T2L2 129 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 GPR157Q5UAW9 335 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 TMEM225Q6GV28 225 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 FAM166AQ6J272 317 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 DNM1P34Q6PK57 102 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 DHRS11Q6UWP2 260 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 FJX1Q86VR8 437 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 SFTPA1Q8IWL2 248 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 LRRC18Q8N456 261 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 JAGN1Q8N5M9 183 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 RFLNBQ8N5W9 214 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 ARL6IP6Q8N6S5 226 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 PNLDC1Q8NA58 520 aaKnown RBP5.8□□□□□ -1.48
USP28-202ENST00000535607 UBAC2Q8NBM4 344 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 CHST4Q8NCG5 386 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 OR5T3Q8NGG3 340 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 OR51L1Q8NGJ5 315 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 OR13C8Q8NGS7 320 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 OR2A1Q8NGT9 310 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 OR6N2Q8NGY6 317 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 OR4K15Q8NH41 348 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 LYPD6BQ8NI32 183 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 M1APQ8TC57 530 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 STT3BQ8TCJ2 826 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 LIPHQ8WWY8 451 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 METTL21AQ8WXB1 218 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 LINC00476Q8WZB0 136 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 AQP3Q92482 292 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 CLDN23Q96B33 292 aa5.8□□□□□ -1.48
USP28-202ENST00000535607 Q96M85 177 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms