RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 SNF8Q96H20 258 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 RNF170Q96K19 258 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 ALS2CR12Q96Q35 445 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 ATP5SQ99766 215 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 THTPAQ9BU02 230 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 ANKRD60Q9BZ19 345 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 NEUROG2Q9H2A3 272 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 RWDD1Q9H446 243 aaPredicted RBP-0.36□□□□□ -2.47
COPB1-212ENST00000534771 SND1-IT1Q9HBX3 110 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 FGF20Q9NP95 211 aaPredicted RBP-0.36□□□□□ -2.47
COPB1-212ENST00000534771 NT5MQ9NPB1 228 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 TAS2R9Q9NYW1 312 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 LSM7Q9UK45 103 aaKnown RBP-0.36□□□□□ -2.47
COPB1-212ENST00000534771 KLF13Q9Y2Y9 288 aaPredicted RBP-0.36□□□□□ -2.47
COPB1-212ENST00000534771 KLK5Q9Y337 293 aaPredicted RBP-0.36□□□□□ -2.47
COPB1-212ENST00000534771 KIF3AQ9Y496 699 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 PLXNB3Q9ULL4 1909 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 MUC2Q02817 5179 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 IGHV3-21A0A0B4J1V1 117 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 A0A0J9YX75 114 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 A0A1W2PRG6 482 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 ARRDC5A6NEK1 342 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 PSPHP1O15172 72 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 RAD51CO43502 376 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 SEC22BO75396 215 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 IDH1O75874 414 aaKnown RBP-0.37□□□□□ -2.47
COPB1-212ENST00000534771 FLOT1O75955 427 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 UGT2B4P06133 528 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 CDK1P06493 297 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 CT45A6P0DMU7 189 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 CT45A5P0DMU8 189 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 CT45A7P0DMV0 189 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 DBTP11182 482 aaKnown RBP-0.37□□□□□ -2.47
COPB1-212ENST00000534771 IL10P22301 178 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 PAX6P26367 422 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 GNRHRP30968 328 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 PRSS3P35030 304 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 GGT2P36268 569 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 HTR2BP41595 481 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 MAGEA1P43355 309 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 ACLYP53396 1101 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 ZNF33AQ06730 810 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 MGAT3Q09327 533 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 BCL2A1Q16548 175 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 CT45A1Q5HYN5 189 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 PPM1LQ5SGD2 360 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 TIMM23BQ5SRD1 257 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 C10orf91Q5T1B1 145 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 REEP3Q6NUK4 255 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 Q6ZPB1 254 aaPredicted RBP-0.37□□□□□ -2.47
COPB1-212ENST00000534771 H2BFWTQ7Z2G1 175 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 EFL1Q7Z2Z2 1120 aaKnown RBP-0.37□□□□□ -2.47
COPB1-212ENST00000534771 SBSPONQ8IVN8 264 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 ZFP82Q8N141 532 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 ZDHHC22Q8N966 263 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 ZIC4Q8N9L1 334 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 OR8A1Q8NGG7 326 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 OR1L6Q8NGR2 347 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 CT45A3Q8NHU0 189 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 OR51E1Q8TCB6 317 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 SFXN5Q8TD22 340 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 SPACA4Q8TDM5 124 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 TMBIM1Q969X1 311 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 DDIT4LQ96D03 193 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 COQ2Q96H96 371 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 TMEM237Q96Q45 408 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 GPR22Q99680 433 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 TXNIPQ9H3M7 391 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 FANCEQ9HB96 536 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 MRM3Q9HC36 420 aaKnown RBP-0.37□□□□□ -2.47
COPB1-212ENST00000534771 RGS18Q9NS28 235 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 RBFOX1Q9NWB1 397 aaKnown RBP-0.37□□□□□ -2.47
COPB1-212ENST00000534771 HRASLS2Q9NWW9 162 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 TERF2IPQ9NYB0 399 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 UXTQ9UBK9 157 aaPredicted RBP-0.37□□□□□ -2.47
COPB1-212ENST00000534771 SLC23A2Q9UGH3 650 aa-0.37□□□□□ -2.47
COPB1-212ENST00000534771 PTBP2Q9UKA9 531 aaKnown RBP-0.37□□□□□ -2.47
COPB1-212ENST00000534771 NAV3Q8IVL0 2385 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 HRNRQ86YZ3 2850 aaPredicted RBP-0.38□□□□□ -2.47
COPB1-212ENST00000534771 TRPM3Q9HCF6 1732 aaPredicted RBP-0.38□□□□□ -2.47
COPB1-212ENST00000534771 A0A075B6Q4 140 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 C15orf38-AP3S2A0A0A6YYH1 394 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 C9JQL5 133 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 AP3B1O00203 1094 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 ISLRO14498 428 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 RGS5O15539 181 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 TIMM8AO60220 97 aaPredicted RBP-0.38□□□□□ -2.47
COPB1-212ENST00000534771 CACNG3O60359 315 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 DIRAS3O95661 229 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 HLA-AP01891 365 aaKnown RBP-0.38□□□□□ -2.47
COPB1-212ENST00000534771 C1QCP02747 245 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 KRT13P13646 458 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 CPMP14384 443 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 ATP1B2P14415 290 aaPredicted RBP-0.38□□□□□ -2.47
COPB1-212ENST00000534771 ZNF7P17097 686 aaPredicted RBP-0.38□□□□□ -2.47
COPB1-212ENST00000534771 MYCNOSP40205 109 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 GPR4P46093 362 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 CAMLGP49069 296 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 XKP51811 444 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 SLC18A1P54219 525 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms