RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 H2BFMP0C1H6 154 aa14.69□□□□□ -0.06
UBXN1-216ENST00000533908 NDUFB7P17568 137 aa14.69□□□□□ -0.06
UBXN1-216ENST00000533908 KIR2DS4P43632 304 aa14.69□□□□□ -0.06
UBXN1-216ENST00000533908 CAV3P56539 151 aa14.69□□□□□ -0.06
UBXN1-216ENST00000533908 HERPUD1Q15011 391 aa14.69□□□□□ -0.06
UBXN1-216ENST00000533908 FBLN7Q53RD9 439 aa14.69□□□□□ -0.06
UBXN1-216ENST00000533908 DMRTC1Q5HYR2 192 aa14.69□□□□□ -0.06
UBXN1-216ENST00000533908 DEFB107AQ8IZN7 70 aa14.69□□□□□ -0.06
UBXN1-216ENST00000533908 CFHR4Q92496 578 aa14.69□□□□□ -0.06
UBXN1-216ENST00000533908 NIPSNAP1Q9BPW8 284 aa14.69□□□□□ -0.06
UBXN1-216ENST00000533908 TAS2R1Q9NYW7 299 aa14.69□□□□□ -0.06
UBXN1-216ENST00000533908 NLKQ9UBE8 527 aa14.69□□□□□ -0.06
UBXN1-216ENST00000533908 ZNF222Q9UK12 451 aa14.69□□□□□ -0.06
UBXN1-216ENST00000533908 NKX6-3A6NJ46 265 aa14.68□□□□□ -0.06
UBXN1-216ENST00000533908 TMEM210A6NLX4 147 aa14.68□□□□□ -0.06
UBXN1-216ENST00000533908 RIIAD1A6NNX1 92 aa14.68□□□□□ -0.06
UBXN1-216ENST00000533908 IFNGP01579 166 aa14.68□□□□□ -0.06
UBXN1-216ENST00000533908 PSG2P11465 335 aa14.68□□□□□ -0.06
UBXN1-216ENST00000533908 POU1F1P28069 291 aa14.68□□□□□ -0.06
UBXN1-216ENST00000533908 GABRA2P47869 451 aa14.68□□□□□ -0.06
UBXN1-216ENST00000533908 KPRPQ5T749 579 aaPredicted RBP14.68□□□□□ -0.06
UBXN1-216ENST00000533908 SAMD5Q5TGI4 173 aa14.68□□□□□ -0.06
UBXN1-216ENST00000533908 NCR3LG1Q68D85 454 aa14.68□□□□□ -0.06
UBXN1-216ENST00000533908 KCTD8Q6ZWB6 473 aa14.68□□□□□ -0.06
UBXN1-216ENST00000533908 SHFQ7M4L6 423 aa14.68□□□□□ -0.06
UBXN1-216ENST00000533908 PIFOQ8TCI5 191 aa14.68□□□□□ -0.06
UBXN1-216ENST00000533908 OTULINQ96BN8 352 aa14.68□□□□□ -0.06
UBXN1-216ENST00000533908 MEGF9Q9H1U4 602 aa14.68□□□□□ -0.06
UBXN1-216ENST00000533908 OR51V1Q9H2C8 321 aa14.68□□□□□ -0.06
UBXN1-216ENST00000533908 RGCCQ9H4X1 137 aa14.68□□□□□ -0.06
UBXN1-216ENST00000533908 ACTR3BQ9P1U1 418 aa14.68□□□□□ -0.06
UBXN1-216ENST00000533908 TAGLN3Q9UI15 199 aa14.68□□□□□ -0.06
UBXN1-216ENST00000533908 PLXNB1O43157 2135 aa14.68□□□□□ -0.06
UBXN1-216ENST00000533908 A0A1W2PQ09 198 aa14.67□□□□□ -0.06
UBXN1-216ENST00000533908 SELENOFO60613 162 aa14.67□□□□□ -0.06
UBXN1-216ENST00000533908 OPN1MWP04001 364 aa14.67□□□□□ -0.06
UBXN1-216ENST00000533908 OPN1MW2P0DN77 364 aa14.67□□□□□ -0.06
UBXN1-216ENST00000533908 OPN1MW3P0DN78 364 aa14.67□□□□□ -0.06
UBXN1-216ENST00000533908 ZNF3P17036 446 aa14.67□□□□□ -0.06
UBXN1-216ENST00000533908 ERVFRD-1P60508 538 aa14.67□□□□□ -0.06
UBXN1-216ENST00000533908 HSP90B2PQ58FF3 399 aa14.67□□□□□ -0.06
UBXN1-216ENST00000533908 Q6ZTK2 550 aa14.67□□□□□ -0.06
UBXN1-216ENST00000533908 C11orf42Q8N5U0 333 aa14.67□□□□□ -0.06
UBXN1-216ENST00000533908 OR8B12Q8NGG6 310 aa14.67□□□□□ -0.06
UBXN1-216ENST00000533908 OTOSQ8NHW6 89 aa14.67□□□□□ -0.06
UBXN1-216ENST00000533908 THEM6Q8WUY1 208 aa14.67□□□□□ -0.06
UBXN1-216ENST00000533908 OR51I2Q9H344 312 aa14.67□□□□□ -0.06
UBXN1-216ENST00000533908 C19orf12Q9NSK7 152 aa14.67□□□□□ -0.06
UBXN1-216ENST00000533908 SF3B6Q9Y3B4 125 aaKnown RBP14.67□□□□□ -0.06
UBXN1-216ENST00000533908 SAMHD1Q9Y3Z3 626 aaKnown RBP14.67□□□□□ -0.06
UBXN1-216ENST00000533908 H0YAE9 185 aa14.66□□□□□ -0.06
UBXN1-216ENST00000533908 GLRA1P23415 457 aa14.66□□□□□ -0.06
UBXN1-216ENST00000533908 GPM6AP51674 278 aa14.66□□□□□ -0.06
UBXN1-216ENST00000533908 HCCSP53701 268 aa14.66□□□□□ -0.06
UBXN1-216ENST00000533908 MS4A2Q01362 244 aa14.66□□□□□ -0.06
UBXN1-216ENST00000533908 SNCBQ16143 134 aa14.66□□□□□ -0.06
UBXN1-216ENST00000533908 SPATS1Q496A3 300 aa14.66□□□□□ -0.06
UBXN1-216ENST00000533908 OR2T5Q6IEZ7 315 aa14.66□□□□□ -0.06
UBXN1-216ENST00000533908 CD300LDQ6UXZ3 194 aa14.66□□□□□ -0.06
UBXN1-216ENST00000533908 Q6ZPA2 131 aa14.66□□□□□ -0.06
UBXN1-216ENST00000533908 KRT74Q7RTS7 529 aa14.66□□□□□ -0.06
UBXN1-216ENST00000533908 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.66□□□□□ -0.06
UBXN1-216ENST00000533908 MKXQ8IYA7 352 aa14.66□□□□□ -0.06
UBXN1-216ENST00000533908 ZDHHC23Q8IYP9 409 aa14.66□□□□□ -0.06
UBXN1-216ENST00000533908 OR2T29Q8NH02 315 aa14.66□□□□□ -0.06
UBXN1-216ENST00000533908 FEVQ99581 238 aa14.66□□□□□ -0.06
UBXN1-216ENST00000533908 YY1AP1Q9H869 796 aa14.66□□□□□ -0.06
UBXN1-216ENST00000533908 MED4Q9NPJ6 270 aa14.66□□□□□ -0.06
UBXN1-216ENST00000533908 ZNF732B4DXR9 585 aa14.65□□□□□ -0.06
UBXN1-216ENST00000533908 ANGPTL7O43827 346 aa14.65□□□□□ -0.06
UBXN1-216ENST00000533908 CHST1O43916 411 aa14.65□□□□□ -0.06
UBXN1-216ENST00000533908 LYNP07948 512 aa14.65□□□□□ -0.06
UBXN1-216ENST00000533908 BLMHQ13867 455 aa14.65□□□□□ -0.06
UBXN1-216ENST00000533908 PLBD1Q6P4A8 553 aa14.65□□□□□ -0.06
UBXN1-216ENST00000533908 FAM185AQ8N0U4 392 aa14.65□□□□□ -0.06
UBXN1-216ENST00000533908 LYG1Q8N1E2 194 aa14.65□□□□□ -0.06
UBXN1-216ENST00000533908 FTMTQ8N4E7 242 aa14.65□□□□□ -0.06
UBXN1-216ENST00000533908 KLHDC1Q8N7A1 406 aa14.65□□□□□ -0.06
UBXN1-216ENST00000533908 TMEM185AQ8NFB2 350 aa14.65□□□□□ -0.06
UBXN1-216ENST00000533908 OR51G2Q8NGK0 314 aa14.65□□□□□ -0.06
UBXN1-216ENST00000533908 SDSLQ96GA7 329 aa14.65□□□□□ -0.06
UBXN1-216ENST00000533908 REEP1Q9H902 201 aa14.65□□□□□ -0.06
UBXN1-216ENST00000533908 ABCB9Q9NP78 766 aa14.65□□□□□ -0.06
UBXN1-216ENST00000533908 PSMA6P60900 246 aaKnown RBP14.64□□□□□ -0.07
UBXN1-216ENST00000533908 LRRC75BQ2VPJ9 315 aa14.64□□□□□ -0.07
UBXN1-216ENST00000533908 CEP78Q5JTW2 689 aa14.64□□□□□ -0.07
UBXN1-216ENST00000533908 C16orf89Q6UX73 402 aa14.64□□□□□ -0.07
UBXN1-216ENST00000533908 CD177Q8N6Q3 437 aa14.64□□□□□ -0.07
UBXN1-216ENST00000533908 OR10G2Q8NGC3 310 aa14.64□□□□□ -0.07
UBXN1-216ENST00000533908 OR5D13Q8NGL4 314 aa14.64□□□□□ -0.07
UBXN1-216ENST00000533908 TEX47Q8TBZ9 253 aa14.64□□□□□ -0.07
UBXN1-216ENST00000533908 AQP3Q92482 292 aa14.64□□□□□ -0.07
UBXN1-216ENST00000533908 PPP1R14AQ96A00 147 aa14.64□□□□□ -0.07
UBXN1-216ENST00000533908 MAGIXQ9H6Y5 334 aa14.64□□□□□ -0.07
UBXN1-216ENST00000533908 GNG3P63215 75 aa14.63□□□□□ -0.07
UBXN1-216ENST00000533908 GINS1Q14691 196 aa14.63□□□□□ -0.07
UBXN1-216ENST00000533908 FAM189A2Q15884 450 aa14.63□□□□□ -0.07
UBXN1-216ENST00000533908 CEACAM21Q3KPI0 293 aa14.63□□□□□ -0.07
UBXN1-216ENST00000533908 TMEM200BQ69YZ2 307 aa14.63□□□□□ -0.07
UBXN1-216ENST00000533908 TMEM179BQ7Z7N9 219 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms