RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 PMELP40967 661 aa13.88□□□□□ -0.19
PACSIN3-210ENST00000533686 NR4A2P43354 598 aa13.88□□□□□ -0.19
PACSIN3-210ENST00000533686 GPR6P46095 362 aaPredicted RBP13.88□□□□□ -0.19
PACSIN3-210ENST00000533686 MLLT11Q13015 90 aaPredicted RBP13.88□□□□□ -0.19
PACSIN3-210ENST00000533686 ZNF154Q13106 437 aa13.88□□□□□ -0.19
PACSIN3-210ENST00000533686 TPBGQ13641 420 aa13.88□□□□□ -0.19
PACSIN3-210ENST00000533686 MPPED2Q15777 294 aa13.88□□□□□ -0.19
PACSIN3-210ENST00000533686 UBE2V2Q15819 145 aa13.88□□□□□ -0.19
PACSIN3-210ENST00000533686 ZNF367Q7RTV3 350 aa13.88□□□□□ -0.19
PACSIN3-210ENST00000533686 PARP16Q8N5Y8 322 aa13.88□□□□□ -0.19
PACSIN3-210ENST00000533686 OR11L1Q8NGX0 322 aa13.88□□□□□ -0.19
PACSIN3-210ENST00000533686 TSEN15Q8WW01 171 aaKnown RBP13.88□□□□□ -0.19
PACSIN3-210ENST00000533686 BPESC1Q9GZL8 116 aa13.88□□□□□ -0.19
PACSIN3-210ENST00000533686 TREM2Q9NZC2 230 aa13.88□□□□□ -0.19
PACSIN3-210ENST00000533686 SLC7A11Q9UPY5 501 aa13.88□□□□□ -0.19
PACSIN3-210ENST00000533686 CHD3Q12873 2000 aaKnown RBP13.88□□□□□ -0.19
PACSIN3-210ENST00000533686 IGHV3-64DA0A0J9YX35 117 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 TRIM64BA6NI03 449 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 ZNF732B4DXR9 585 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 TMEM178BH3BS89 294 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 PPIHO43447 177 aaKnown RBP13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 ALX3O95076 343 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 TNFAIP8O95379 198 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 CD2P06729 351 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 OCM2P0CE71 109 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 PCMT1P22061 227 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 GPM6AP51674 278 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 RPS11P62280 158 aaKnown RBP eCLIP13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 CNN3Q15417 329 aaKnown RBP13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 SERPINA12Q8IW75 414 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 C11orf53Q8IXP5 236 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 C1orf87Q8N0U7 546 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 MS4A15Q8N5U1 240 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 OR5D14Q8NGL3 314 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 ZNF420Q8TAQ5 688 aaPredicted RBP13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 UFD1Q92890 307 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 RAB1CQ92928 201 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 TIMD4Q96H15 378 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 MGLLQ99685 303 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 REG4Q9BYZ8 158 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 UFSP2Q9NUQ7 469 aa13.87□□□□□ -0.19
PACSIN3-210ENST00000533686 PNMA8CA0A1B0GUJ8 204 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 PQLC2LA1A4F0 135 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 LRP5LA4QPB2 252 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 FSTL3O95633 263 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 IRF2P14316 349 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 ATF1P18846 271 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 CFHR2P36980 270 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 FUT6P51993 359 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 Q499Y3 187 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 UBE2UQ5VVX9 321 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 KCTD8Q6ZWB6 473 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 PEG10Q86TG7 708 aaKnown RBP13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 DNAAF1Q8NEP3 725 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 FCGR1BQ92637 280 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 THRSPQ92748 146 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 OPALINQ96PE5 141 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 OR51I2Q9H344 312 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 ZCCHC4Q9H5U6 513 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 C1orf123Q9NWV4 160 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 DCAF16Q9NXF7 216 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 RNF7Q9UBF6 113 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 NPTNQ9Y639 398 aa13.86□□□□□ -0.19
PACSIN3-210ENST00000533686 A0A096LNT2 108 aa13.85□□□□□ -0.19
PACSIN3-210ENST00000533686 IGKV1-9A0A0C4DH69 117 aa13.85□□□□□ -0.19
PACSIN3-210ENST00000533686 A6NLC8 198 aa13.85□□□□□ -0.19
PACSIN3-210ENST00000533686 HSMCR30P0CW71 290 aa13.85□□□□□ -0.19
PACSIN3-210ENST00000533686 CPEP16870 476 aa13.85□□□□□ -0.19
PACSIN3-210ENST00000533686 PRKACBP22694 351 aa13.85□□□□□ -0.19
PACSIN3-210ENST00000533686 SOX2P48431 317 aa13.85□□□□□ -0.19
PACSIN3-210ENST00000533686 LOXL1Q08397 574 aaPredicted RBP13.85□□□□□ -0.19
PACSIN3-210ENST00000533686 DMRTC1Q5HYR2 192 aa13.85□□□□□ -0.19
PACSIN3-210ENST00000533686 LIPKQ5VXJ0 399 aa13.85□□□□□ -0.19
PACSIN3-210ENST00000533686 ZNF529Q6P280 563 aa13.85□□□□□ -0.19
PACSIN3-210ENST00000533686 ZNF573Q86YE8 665 aa13.85□□□□□ -0.19
PACSIN3-210ENST00000533686 OR13C5Q8NGS8 318 aa13.85□□□□□ -0.19
PACSIN3-210ENST00000533686 OR10Z1Q8NGY1 313 aa13.85□□□□□ -0.19
PACSIN3-210ENST00000533686 TMEM106AQ96A25 262 aa13.85□□□□□ -0.19
PACSIN3-210ENST00000533686 SPSB1Q96BD6 273 aa13.85□□□□□ -0.19
PACSIN3-210ENST00000533686 ZNF696Q9H7X3 374 aa13.85□□□□□ -0.19
PACSIN3-210ENST00000533686 NEK6Q9HC98 313 aa13.85□□□□□ -0.19
PACSIN3-210ENST00000533686 WIPI2Q9Y4P8 454 aa13.85□□□□□ -0.19
PACSIN3-210ENST00000533686 ITPR3Q14573 2671 aa13.85□□□□□ -0.19
PACSIN3-210ENST00000533686 ZNF879B4DU55 563 aa13.84□□□□□ -0.19
PACSIN3-210ENST00000533686 RNF223E7ERA6 249 aa13.84□□□□□ -0.19
PACSIN3-210ENST00000533686 CDIPTO14735 213 aa13.84□□□□□ -0.19
PACSIN3-210ENST00000533686 CYB5R3P00387 301 aaPredicted RBP13.84□□□□□ -0.19
PACSIN3-210ENST00000533686 LHBP01229 141 aa13.84□□□□□ -0.19
PACSIN3-210ENST00000533686 USF1P22415 310 aaPredicted RBP13.84□□□□□ -0.19
PACSIN3-210ENST00000533686 TRAM1Q15629 374 aa13.84□□□□□ -0.19
PACSIN3-210ENST00000533686 WDR82Q6UXN9 313 aa13.84□□□□□ -0.19
PACSIN3-210ENST00000533686 ZNF826PQ6ZT77 177 aa13.84□□□□□ -0.19
PACSIN3-210ENST00000533686 SCCPDHQ8NBX0 429 aa13.84□□□□□ -0.19
PACSIN3-210ENST00000533686 RPL3LQ92901 407 aaKnown RBP13.84□□□□□ -0.19
PACSIN3-210ENST00000533686 BORCS8Q96FH0 119 aa13.84□□□□□ -0.19
PACSIN3-210ENST00000533686 NR1H4Q96RI1 486 aaPredicted RBP13.84□□□□□ -0.19
PACSIN3-210ENST00000533686 TMUB1Q9BVT8 246 aa13.84□□□□□ -0.19
PACSIN3-210ENST00000533686 MAP1AP78559 2803 aaPredicted RBP13.84□□□□□ -0.19
PACSIN3-210ENST00000533686 DYSFO75923 2080 aa13.83□□□□□ -0.2
PACSIN3-210ENST00000533686 PPIAL4EA0A075B759 164 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms