RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 TRAPPC2LH3BP13 241 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 LGALS8O00214 317 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 AVPP01185 164 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 AMY2BP19961 511 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 DCKP27707 260 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 CD80P33681 288 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 ETV1P50549 477 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 AQP4P55087 323 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 PAX2Q02962 417 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 CEP78Q5JTW2 689 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 FAM120AOSQ5T036 256 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 TEX36Q5VZQ5 186 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 C1orf229Q6ZS94 237 aaPredicted RBP11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 MOB3CQ70IA8 216 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 ZNF771Q7L3S4 317 aaPredicted RBP11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 FAM220AQ7Z4H9 259 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 COMMD2Q86X83 199 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 PRIMA1Q86XR5 153 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 C8orf59Q8N0T1 100 aaPredicted RBP11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 MUC20Q8N307 709 aaPredicted RBP11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 KLHL36Q8N4N3 616 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 DEFB108BQ8NET1 73 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 OR10AC1Q8NH08 325 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 OR51F2Q8NH61 342 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 RPS4Y2Q8TD47 263 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 RPL3LQ92901 407 aaKnown RBP11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 SEH1LQ96EE3 360 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 RTL8AQ9BWD3 113 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 CLEC2DQ9UHP7 191 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 ENPP5Q9UJA9 477 aa11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 DIMT1Q9UNQ2 313 aaKnown RBP11.64□□□□□ -0.55
TSPAN4-220ENST00000532375 TRAV20A0A0B4J274 112 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 LOC107986453A0A1B0GWG9 222 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 A6NLC8 198 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 SRRM5B3KS81 715 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 H3BSH0 61 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 SYT7O43581 403 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 XPNPEP2O43895 674 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 NRASP01111 189 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 IRF2P14316 349 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 CPT2P23786 658 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 GPM6AP51674 278 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 ACTA2P62736 377 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 GNG3P63215 75 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 ACTG2P63267 376 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 ALKBH1Q13686 389 aaKnown RBP11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 DOC2BQ14184 412 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 UBE2V2Q15819 145 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 KRTAP21-3Q3LHN1 58 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 CLVS2Q5SYC1 327 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 SFRP4Q6FHJ7 346 aaPredicted RBP11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 XAF1Q6GPH4 301 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 THAP5Q7Z6K1 395 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 GLCCI1Q86VQ1 547 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 CCDC54Q8NEL0 328 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 OR10Z1Q8NGY1 313 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 LRRC29Q8WV35 223 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 MMP26Q9NRE1 261 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 GPR173Q9NS66 373 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 FKBP14Q9NWM8 211 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 CTSZQ9UBR2 303 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 PSORS1C1Q9UIG5 152 aa11.63□□□□□ -0.55
TSPAN4-220ENST00000532375 PPIAL4CA0A0B4J2A2 164 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 A0A1B0GVI7 797 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 PQLC2LA1A4F0 135 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 OOEPA6NGQ2 149 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 OR5B21A6NL26 309 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 RHBDL1O75783 438 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 LALBAP00709 142 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 HTR1AP08908 422 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 UBCP0CG48 685 aaKnown RBP11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 PIPP12273 146 aaPredicted RBP11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 TGM4P49221 684 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 GTF2A1P52655 376 aaPredicted RBP11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 LCN2P80188 198 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 OR2G6Q5TZ20 316 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 TMEM244Q5VVB8 128 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 DCDC5Q6ZRR9 648 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 IL17RELQ6ZVW7 336 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 FAM90A1Q86YD7 464 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 OR51A4Q8NGJ6 313 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 ADAT3Q96EY9 351 aaPredicted RBP11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 TMPRSS13Q9BYE2 586 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 WDR13Q9H1Z4 485 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 MIOXQ9UGB7 285 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 CDC42EP3Q9UKI2 254 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 PCDHB10Q9UN67 800 aa11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 CAB39Q9Y376 341 aaPredicted RBP11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 SIRT4Q9Y6E7 314 aaPredicted RBP11.62□□□□□ -0.55
TSPAN4-220ENST00000532375 IGKV1-27A0A075B6S5 117 aa11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 IGHV3OR15-7A0A075B7D8 119 aa11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 IGKV1-9A0A0C4DH69 117 aa11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 hCG_1807616A0A1W2PRN6 198 aa11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 PHF1O43189 567 aaPredicted RBP11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 FOXH1O75593 365 aa11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 ZFPL1O95159 310 aa11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 ATP6V1G2O95670 118 aa11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 ST3GAL4Q11206 333 aa11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 CHRFAM7AQ494W8 412 aa11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 C6orf141Q5SZD1 244 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms