RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, human

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP98-215	ENST00000529063	IFNA8	P32881	189 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	CENPA	P49450	140 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	ECH1	Q13011	328 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	DGCR6	Q14129	220 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	KLHL12	Q53G59	568 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	METTL21C	Q5VZV1	264 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	STUM	Q69YW2	141 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	C11orf87	Q6NUJ2	197 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	DNM1P34	Q6PK57	102 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	SMARCD3	Q6STE5	483 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	WDR82	Q6UXN9	313 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	SLC15A3	Q8IY34	581 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	GALNT4	Q8N4A0	578 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	FAM86B1	Q8N7N1	296 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	SDR9C7	Q8NEX9	313 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	WIPF2	Q8TF74	440 aa	Predicted RBP	4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	NPRL2	Q8WTW4	380 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	LRRC29	Q8WV35	223 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	LZIC	Q8WZA0	190 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	RORB	Q92753	470 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	TFAP2C	Q92754	450 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	PHF21A	Q96BD5	680 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	C7orf34	Q96L11	122 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	ERMAP	Q96PL5	475 aa	Predicted RBP	4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	PITX2	Q99697	317 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	DCTN5	Q9BTE1	182 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	FGF23	Q9GZV9	251 aa	Predicted RBP	4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	SLC22A4	Q9H015	551 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	OR52D1	Q9H346	318 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	TRIM36	Q9NQ86	728 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	RPRD1B	Q9NQG5	326 aa	Known RBP	4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	SAR1A	Q9NR31	198 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	MRPS18A	Q9NVS2	196 aa	Known RBP	4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	MRPL15	Q9P015	296 aa	Known RBP	4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	PRPF19	Q9UMS4	504 aa	Known RBP	4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	FAM96B	Q9Y3D0	163 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	ENPP4	Q9Y6X5	453 aa		4.88	□□□□□ -1.63
NUP98-215	ENST00000529063	LOC100653049	A0A140TA62	436 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	hCG_1807616	A0A1W2PRN6	198 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	MEIOC	A2RUB1	952 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	BTBD17	A6NE02	478 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	GGT3P	A6NGU5	568 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	UNC119B	A6NIH7	251 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	BHLHE40	O14503	412 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	ARPC3	O15145	178 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	RRP9	O43818	475 aa	Known RBP	4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	KRT34	O76011	436 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	DIRAS1	O95057	198 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	H1F0	P07305	194 aa	Known RBP	4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	NCK1	P16333	377 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	PYCR1	P32322	319 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	KIR2DS4	P43632	304 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	TGM4	P49221	684 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	GSK3B	P49841	420 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	RPS6KA3	P51812	740 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	UBE2E1	P51965	193 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	TPTE	P56180	551 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	LOXL3	P58215	753 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	LIPE	Q05469	1076 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	LY6E	Q16553	131 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	DGUOK	Q16854	277 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	RNF151	Q2KHN1	245 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	FGD3	Q5JSP0	725 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063		Q6ZTK2	550 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	KCTD20	Q7Z5Y7	419 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	LNX2	Q8N448	690 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	BEND2	Q8NDZ0	799 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	OR1M1	Q8NGA1	313 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	OR4K13	Q8NH42	304 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	OR5R1	Q8NH85	324 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	FANK1	Q8TC84	345 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	PIFO	Q8TCI5	191 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	DYDC1	Q8WWB3	177 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	RCN3	Q96D15	328 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	GAFA1	Q96PS6	74 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	DDO	Q99489	341 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	NDEL1	Q9GZM8	345 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	TLNRD1	Q9H1K6	362 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	WDR13	Q9H1Z4	485 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	MMP28	Q9H239	520 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	ZNF702P	Q9H963	129 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	RNPEPL1	Q9HAU8	725 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	ELL3	Q9HB65	397 aa	Predicted RBP	4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	INTS9	Q9NV88	658 aa	Known RBP	4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	NECAP2	Q9NVZ3	263 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	NDUFAF4	Q9P032	175 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	AURKC	Q9UQB9	309 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	CAB39	Q9Y376	341 aa	Predicted RBP	4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	NOP16	Q9Y3C1	178 aa	Known RBP	4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	MAB21L2	Q9Y586	359 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	COMMD3-BMI1	R4GMX3	469 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	DNAH1	Q9P2D7	4330 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	TENM3	Q9P273	2699 aa		4.87	□□□□□ -1.63
NUP98-215	ENST00000529063	hCG_38984	A0A1B0GV85	526 aa		4.86	□□□□□ -1.63
NUP98-215	ENST00000529063		A0A1W2PRX2	142 aa		4.86	□□□□□ -1.63
NUP98-215	ENST00000529063	ANKRD61	A6NGH8	418 aa		4.86	□□□□□ -1.63
NUP98-215	ENST00000529063	TVP23A	A6NH52	213 aa		4.86	□□□□□ -1.63
NUP98-215	ENST00000529063		K7EIL1	84 aa		4.86	□□□□□ -1.63

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