RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 CCDC54Q8NEL0 328 aa10.07□□□□□ -0.8
TRAPPC4-209ENST00000528230 OR10H4Q8NGA5 316 aa10.07□□□□□ -0.8
TRAPPC4-209ENST00000528230 HPSE2Q8WWQ2 592 aa10.07□□□□□ -0.8
TRAPPC4-209ENST00000528230 RPL3LQ92901 407 aaKnown RBP10.07□□□□□ -0.8
TRAPPC4-209ENST00000528230 UBE2FQ969M7 185 aa10.07□□□□□ -0.8
TRAPPC4-209ENST00000528230 UPRTQ96BW1 309 aa10.07□□□□□ -0.8
TRAPPC4-209ENST00000528230 FAM71F1Q96KD3 344 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC4-209ENST00000528230 DMRTB1Q96MA1 342 aa10.07□□□□□ -0.8
TRAPPC4-209ENST00000528230 FGF23Q9GZV9 251 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC4-209ENST00000528230 DNTTIP1Q9H147 329 aa10.07□□□□□ -0.8
TRAPPC4-209ENST00000528230 OR51I2Q9H344 312 aa10.07□□□□□ -0.8
TRAPPC4-209ENST00000528230 PIGLQ9Y2B2 252 aa10.07□□□□□ -0.8
TRAPPC4-209ENST00000528230 PCDHGB1Q9Y5G3 927 aa10.07□□□□□ -0.8
TRAPPC4-209ENST00000528230 V9GYS6 101 aa10.07□□□□□ -0.8
TRAPPC4-209ENST00000528230 SVEP1Q4LDE5 3571 aa10.07□□□□□ -0.8
TRAPPC4-209ENST00000528230 A0A1B0GTI1 187 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 ZNF732B4DXR9 585 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 DLGAP1O14490 977 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 GPR37O15354 613 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 MPZL2O60487 215 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 ENTPD6O75354 484 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 NRASP01111 189 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 CCL1P22362 96 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 GPM6AP51674 278 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 ACTC1P68032 377 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 ACTA1P68133 377 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 SRSF2Q01130 221 aaKnown RBP10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 TMEM42Q69YG0 159 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 KCTD8Q6ZWB6 473 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 MOB3CQ70IA8 216 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 DOK3Q7L591 496 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 SLC36A1Q7Z2H8 476 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 KCTD20Q7Z5Y7 419 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 CATSPERDQ86XM0 798 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 OR14K1Q8NGZ2 314 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 ZNF671Q8TAW3 534 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 TECTBQ96PL2 329 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 TBX5Q99593 518 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 SLC29A1Q99808 456 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 GTF2A1LQ9UNN4 478 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 SLC22A13Q9Y226 551 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 GMPPBQ9Y5P6 360 aa10.06□□□□□ -0.8
TRAPPC4-209ENST00000528230 IGHV3OR15-7A0A075B7D8 119 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 C22orf46C9J442 243 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 TRIM77I1YAP6 450 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 J3QRE1 110 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 DVL1O14640 695 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 TMPRSS2O15393 492 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 RPP14O95059 124 aaKnown RBP10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 APOL3O95236 402 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 FAHP16930 419 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 GABRB1P18505 474 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 TGM4P49221 684 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 BPIFB3P59826 476 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 ISL1P61371 349 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 ZNF85Q03923 595 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 CEP78Q5JTW2 689 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 CLVS2Q5SYC1 327 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 C9orf139Q6ZV77 190 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 EGFL6Q8IUX8 553 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 PNLDC1Q8NA58 520 aaKnown RBP10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 RORBQ92753 470 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 RNFT2Q96EX2 444 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 Q96MT0 163 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 MBOAT4Q96T53 435 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 MYCBPQ99417 103 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 SLC6A7Q99884 636 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 SMURF1Q9HCE7 757 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 RASL12Q9NYN1 266 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 DNAJB11Q9UBS4 358 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 ZNF69Q9UC07 566 aa10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 EXOGQ9Y2C4 368 aaKnown RBP10.05□□□□□ -0.8
TRAPPC4-209ENST00000528230 LOC100130705A0A1B0GUX0 176 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 A0A1B0GVI7 797 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 ZNF879B4DU55 563 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 P2RY10O00398 339 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 SLC16A6O15403 523 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 NDUFB3O43676 98 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 BAG2O95816 211 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 PLATP00750 562 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 CDONQ4KMG0 1287 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 WDR38Q5JTN6 314 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 PLCXD3Q63HM9 321 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 STUMQ69YW2 141 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 RBMS3Q6XE24 437 aaKnown RBP10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 ZNF788Q6ZQV5 615 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 BTN2A1Q7KYR7 527 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 FAM220AQ7Z4H9 259 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 ZNF573Q86YE8 665 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 ACBD7Q8N6N7 88 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 RHOXF1Q8NHV9 184 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 FAM216AQ8WUB2 273 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 AQP3Q92482 292 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 STMN2Q93045 179 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 C10orf35Q96D05 121 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 MED30Q96HR3 178 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 RDH12Q96NR8 316 aa10.04□□□□□ -0.8
TRAPPC4-209ENST00000528230 CCL13Q99616 98 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms