RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ANOS1P23352 680 aa11.77□□□□□ -0.53
CAPN1-212ENST00000527887 EPHA2P29317 976 aa11.77□□□□□ -0.53
CAPN1-212ENST00000527887 GABARAPL2P60520 117 aa11.77□□□□□ -0.53
CAPN1-212ENST00000527887 EFNB1P98172 346 aa11.77□□□□□ -0.53
CAPN1-212ENST00000527887 ZNF826PQ6ZT77 177 aa11.77□□□□□ -0.53
CAPN1-212ENST00000527887 SLC36A1Q7Z2H8 476 aa11.77□□□□□ -0.53
CAPN1-212ENST00000527887 FAM90A1Q86YD7 464 aa11.77□□□□□ -0.53
CAPN1-212ENST00000527887 C11orf53Q8IXP5 236 aa11.77□□□□□ -0.53
CAPN1-212ENST00000527887 OR8J1Q8NGP2 316 aa11.77□□□□□ -0.53
CAPN1-212ENST00000527887 THEM6Q8WUY1 208 aa11.77□□□□□ -0.53
CAPN1-212ENST00000527887 GATAD2BQ8WXI9 593 aa11.77□□□□□ -0.53
CAPN1-212ENST00000527887 Q96MT0 163 aa11.77□□□□□ -0.53
CAPN1-212ENST00000527887 WDFY2Q96P53 400 aa11.77□□□□□ -0.53
CAPN1-212ENST00000527887 DUX5Q96PT3 197 aa11.77□□□□□ -0.53
CAPN1-212ENST00000527887 PCGF1Q9BSM1 259 aa11.77□□□□□ -0.53
CAPN1-212ENST00000527887 DNTTIP1Q9H147 329 aa11.77□□□□□ -0.53
CAPN1-212ENST00000527887 SLITRK2Q9H156 845 aa11.77□□□□□ -0.53
CAPN1-212ENST00000527887 IMPAD1Q9NX62 359 aa11.77□□□□□ -0.53
CAPN1-212ENST00000527887 PKD1L1Q8TDX9 2849 aa11.77□□□□□ -0.53
CAPN1-212ENST00000527887 IGHV3OR16-10A0A075B7F0 116 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 A0A087WXM4 84 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 TMEM210A6NLX4 147 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 SRRM5B3KS81 715 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 DVL1O14640 695 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 TMPRSS2O15393 492 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 CST4P01036 141 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 CRHBPP24387 322 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 RPL15P61313 204 aaKnown RBP11.76□□□□□ -0.53
CAPN1-212ENST00000527887 DEFB112Q30KQ8 113 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 FAM76BQ5HYJ3 339 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 ATPAF1Q5TC12 328 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-212ENST00000527887 MEDAGQ5VYS4 303 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 PLBD1Q6P4A8 553 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 WDR82Q6UXN9 313 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 Q6YL49 198 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 KRT74Q7RTS7 529 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 OR10Z1Q8NGY1 313 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 LRRC29Q8WV35 223 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 RTL8AQ9BWD3 113 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 PAPOLGQ9BWT3 736 aaKnown RBP11.76□□□□□ -0.53
CAPN1-212ENST00000527887 MRPS26Q9BYN8 205 aaKnown RBP11.76□□□□□ -0.53
CAPN1-212ENST00000527887 YIPF3Q9GZM5 350 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 CNTD2Q9H8S5 307 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 SCN3BQ9NY72 215 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 DNAJC27Q9NZQ0 273 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 TPRKBQ9Y3C4 175 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 RHBDD3Q9Y3P4 386 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 PCDHGB1Q9Y5G3 927 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 MMP24Q9Y5R2 645 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 KPTNQ9Y664 436 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 POMT1Q9Y6A1 747 aa11.76□□□□□ -0.53
CAPN1-212ENST00000527887 ATP6V1B1P15313 513 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 GABRB1P18505 474 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 ALOX5APP20292 161 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 DCTDP32321 178 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 PSMA6P60900 246 aaKnown RBP11.75□□□□□ -0.53
CAPN1-212ENST00000527887 OCLNQ16625 522 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 KLHL12Q53G59 568 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 PRR31Q5SQ13 230 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 KCTD18Q6PI47 426 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-212ENST00000527887 BRD3OSQ6XYD6 125 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 BTN2A1Q7KYR7 527 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 CPOQ8IVL8 374 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 ENTHD1Q8IYW4 607 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 TSPAN14Q8NG11 270 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 FAM81AQ8TBF8 368 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 NPRL2Q8WTW4 380 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 ITPKCQ96DU7 683 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 HIST1H2AAQ96QV6 131 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 AMELYQ99218 206 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 UNKLQ9H9P5 680 aaKnown RBP11.75□□□□□ -0.53
CAPN1-212ENST00000527887 SMURF1Q9HCE7 757 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 BRD7Q9NPI1 651 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 ACOXLQ9NUZ1 547 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 ZNF319Q9P2F9 582 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 RPUSD1Q9UJJ7 312 aaKnown RBP11.75□□□□□ -0.53
CAPN1-212ENST00000527887 LAMP5Q9UJQ1 280 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 PCDHGB5Q9Y5G0 923 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 TMEM14AQ9Y6G1 99 aa11.75□□□□□ -0.53
CAPN1-212ENST00000527887 CENPVL3A0A0U1RRI6 287 aa11.74□□□□□ -0.53
CAPN1-212ENST00000527887 CDIPTO14735 213 aa11.74□□□□□ -0.53
CAPN1-212ENST00000527887 HOXA3O43365 443 aaPredicted RBP11.74□□□□□ -0.53
CAPN1-212ENST00000527887 ZNF254O75437 659 aa11.74□□□□□ -0.53
CAPN1-212ENST00000527887 CRYBA1P05813 215 aa11.74□□□□□ -0.53
CAPN1-212ENST00000527887 APOFQ13790 326 aa11.74□□□□□ -0.53
CAPN1-212ENST00000527887 GFOD2Q3B7J2 385 aa11.74□□□□□ -0.53
CAPN1-212ENST00000527887 CDONQ4KMG0 1287 aa11.74□□□□□ -0.53
CAPN1-212ENST00000527887 WDR86Q86TI4 376 aa11.74□□□□□ -0.53
CAPN1-212ENST00000527887 LY6G5BQ8NDX9 201 aa11.74□□□□□ -0.53
CAPN1-212ENST00000527887 TBC1D15Q8TC07 691 aa11.74□□□□□ -0.53
CAPN1-212ENST00000527887 SSMEM1Q8WWF3 244 aa11.74□□□□□ -0.53
CAPN1-212ENST00000527887 OR5P3Q8WZ94 311 aa11.74□□□□□ -0.53
CAPN1-212ENST00000527887 TMIGD2Q96BF3 282 aa11.74□□□□□ -0.53
CAPN1-212ENST00000527887 TBX15Q96SF7 602 aa11.74□□□□□ -0.53
CAPN1-212ENST00000527887 SIRPDQ9H106 197 aa11.74□□□□□ -0.53
CAPN1-212ENST00000527887 DUSP21Q9H596 190 aa11.74□□□□□ -0.53
CAPN1-212ENST00000527887 CLN6Q9NWW5 311 aa11.74□□□□□ -0.53
CAPN1-212ENST00000527887 NDUFA13Q9P0J0 144 aa11.74□□□□□ -0.53
CAPN1-212ENST00000527887 MEGF8Q7Z7M0 2845 aa11.74□□□□□ -0.53
CAPN1-212ENST00000527887 IGHV1-69DA0A0B4J2H0 117 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms