RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 DCTN6O00399 190 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 HEXAP06865 529 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 DCTDP32321 178 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 ZNF616Q08AN1 781 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 RSPO4Q2I0M5 234 aaPredicted RBP13.29□□□□□ -0.28
USP47-207ENST00000527733 INO80CQ6PI98 192 aaPredicted RBP13.29□□□□□ -0.28
USP47-207ENST00000527733 MAFIPQ8WZ33 124 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 HAS2Q92819 552 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 ZNF486Q96H40 463 aaPredicted RBP13.29□□□□□ -0.28
USP47-207ENST00000527733 UBL7Q96S82 380 aaPredicted RBP13.29□□□□□ -0.28
USP47-207ENST00000527733 ESRP2Q9H6T0 727 aaKnown RBP13.29□□□□□ -0.28
USP47-207ENST00000527733 A0A1W2PNV4 684 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 ZNF354AO60765 605 aaPredicted RBP13.29□□□□□ -0.28
USP47-207ENST00000527733 KLF3P57682 345 aaPredicted RBP13.29□□□□□ -0.28
USP47-207ENST00000527733 HIKESHIQ53FT3 197 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 C6orf183Q5T699 404 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 PDZD9Q8IXQ8 264 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 C10orf35Q96D05 121 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 SLC7A10Q9NS82 523 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 PLEKHB1Q9UF11 243 aaPredicted RBP13.29□□□□□ -0.28
USP47-207ENST00000527733 NME2P1O60361 137 aa13.28□□□□□ -0.28
USP47-207ENST00000527733 ANXA7P20073 488 aaKnown RBP13.28□□□□□ -0.28
USP47-207ENST00000527733 NME2P22392 152 aa13.28□□□□□ -0.28
USP47-207ENST00000527733 GSK3AP49840 483 aa13.28□□□□□ -0.28
USP47-207ENST00000527733 F2RL1P55085 397 aa13.28□□□□□ -0.28
USP47-207ENST00000527733 DEFA5Q01523 94 aa13.28□□□□□ -0.28
USP47-207ENST00000527733 WDSUB1Q8N9V3 476 aa13.28□□□□□ -0.28
USP47-207ENST00000527733 POFUT1Q9H488 388 aa13.28□□□□□ -0.28
USP47-207ENST00000527733 KCNJ16Q9NPI9 418 aa13.28□□□□□ -0.28
USP47-207ENST00000527733 SPDEFO95238 335 aa13.28□□□□□ -0.28
USP47-207ENST00000527733 TGM1P22735 817 aa13.28□□□□□ -0.28
USP47-207ENST00000527733 DUSP1P28562 367 aa13.28□□□□□ -0.28
USP47-207ENST00000527733 HRH1P35367 487 aa13.28□□□□□ -0.28
USP47-207ENST00000527733 LGALS4P56470 323 aa13.28□□□□□ -0.28
USP47-207ENST00000527733 IAH1Q2TAA2 248 aaPredicted RBP13.28□□□□□ -0.28
USP47-207ENST00000527733 CD276Q5ZPR3 534 aa13.28□□□□□ -0.28
USP47-207ENST00000527733 PGA4P0DJD7 388 aa13.28□□□□□ -0.28
USP47-207ENST00000527733 PGA3P0DJD8 388 aa13.28□□□□□ -0.28
USP47-207ENST00000527733 EGR4Q05215 589 aa13.28□□□□□ -0.28
USP47-207ENST00000527733 SPAG16Q8N0X2 631 aa13.28□□□□□ -0.28
USP47-207ENST00000527733 EXTL1Q92935 676 aa13.28□□□□□ -0.28
USP47-207ENST00000527733 DLL1O00548 723 aa13.27□□□□□ -0.28
USP47-207ENST00000527733 IFNA2P01563 188 aa13.27□□□□□ -0.28
USP47-207ENST00000527733 AKR1C8PQ5T2L2 129 aa13.27□□□□□ -0.28
USP47-207ENST00000527733 CNTD2Q9H8S5 307 aa13.27□□□□□ -0.28
USP47-207ENST00000527733 SLC23A1Q9UHI7 598 aa13.27□□□□□ -0.28
USP47-207ENST00000527733 CACNA1GO43497 2377 aa13.27□□□□□ -0.28
USP47-207ENST00000527733 TMEM272A0A1B0GTI8 110 aa13.27□□□□□ -0.28
USP47-207ENST00000527733 RAB6AP20340 208 aa13.27□□□□□ -0.28
USP47-207ENST00000527733 CAMLGP49069 296 aa13.27□□□□□ -0.28
USP47-207ENST00000527733 FAAP20Q6NZ36 180 aa13.27□□□□□ -0.28
USP47-207ENST00000527733 FBLIM1Q8WUP2 373 aa13.27□□□□□ -0.28
USP47-207ENST00000527733 FZR1Q9UM11 496 aa13.27□□□□□ -0.28
USP47-207ENST00000527733 DNAJC13O75165 2243 aa13.27□□□□□ -0.29
USP47-207ENST00000527733 TMEM229AB2RXF0 380 aa13.27□□□□□ -0.29
USP47-207ENST00000527733 HSD17B6O14756 317 aa13.27□□□□□ -0.29
USP47-207ENST00000527733 LUMP51884 338 aaPredicted RBP13.27□□□□□ -0.29
USP47-207ENST00000527733 C1orf185Q5T7R7 199 aa13.27□□□□□ -0.29
USP47-207ENST00000527733 NLRC3Q7RTR2 1065 aa13.27□□□□□ -0.29
USP47-207ENST00000527733 CXorf67Q86X51 503 aaPredicted RBP13.27□□□□□ -0.29
USP47-207ENST00000527733 DRAXINQ8NBI3 349 aaPredicted RBP13.27□□□□□ -0.29
USP47-207ENST00000527733 CHST6Q9GZX3 395 aa13.27□□□□□ -0.29
USP47-207ENST00000527733 TMA7Q9Y2S6 64 aaKnown RBP13.27□□□□□ -0.29
USP47-207ENST00000527733 THY1P04216 161 aa13.27□□□□□ -0.29
USP47-207ENST00000527733 FCGR2CP31995 323 aa13.27□□□□□ -0.29
USP47-207ENST00000527733 PRSS12P56730 875 aa13.27□□□□□ -0.29
USP47-207ENST00000527733 RPL19P84098 196 aaKnown RBP13.27□□□□□ -0.29
USP47-207ENST00000527733 SFRP5Q5T4F7 317 aa13.27□□□□□ -0.29
USP47-207ENST00000527733 FAM58AQ8N1B3 248 aa13.27□□□□□ -0.29
USP47-207ENST00000527733 OR51H1Q8NH63 302 aa13.27□□□□□ -0.29
USP47-207ENST00000527733 ASB5Q8WWX0 329 aa13.27□□□□□ -0.29
USP47-207ENST00000527733 UPRTQ96BW1 309 aa13.27□□□□□ -0.29
USP47-207ENST00000527733 USB1Q9BQ65 265 aaKnown RBP13.27□□□□□ -0.29
USP47-207ENST00000527733 IGLV1-36A0A0B4J1U3 117 aa13.26□□□□□ -0.29
USP47-207ENST00000527733 TRAF3IP2O43734 574 aaPredicted RBP13.26□□□□□ -0.29
USP47-207ENST00000527733 GUCA2AQ02747 115 aa13.26□□□□□ -0.29
USP47-207ENST00000527733 OR10AC1Q8NH08 325 aa13.26□□□□□ -0.29
USP47-207ENST00000527733 ARID1AO14497 2285 aa13.26□□□□□ -0.29
USP47-207ENST00000527733 ENSAO43768 121 aaKnown RBP13.26□□□□□ -0.29
USP47-207ENST00000527733 RIPPLY2Q5TAB7 128 aa13.26□□□□□ -0.29
USP47-207ENST00000527733 SLC25A47Q6Q0C1 308 aa13.26□□□□□ -0.29
USP47-207ENST00000527733 OR4C16Q8NGL9 310 aa13.26□□□□□ -0.29
USP47-207ENST00000527733 FAM234AQ9H0X4 552 aa13.26□□□□□ -0.29
USP47-207ENST00000527733 GFOD1Q9NXC2 390 aa13.26□□□□□ -0.29
USP47-207ENST00000527733 KLHDC2Q9Y2U9 406 aa13.26□□□□□ -0.29
USP47-207ENST00000527733 K7EPK0 472 aa13.26□□□□□ -0.29
USP47-207ENST00000527733 FABP7O15540 132 aa13.26□□□□□ -0.29
USP47-207ENST00000527733 TPT1P13693 172 aaKnown RBP13.26□□□□□ -0.29
USP47-207ENST00000527733 OR3A4PP47883 348 aa13.26□□□□□ -0.29
USP47-207ENST00000527733 P2RY6Q15077 328 aa13.26□□□□□ -0.29
USP47-207ENST00000527733 FAM71E2Q8N5Q1 922 aa13.26□□□□□ -0.29
USP47-207ENST00000527733 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.26□□□□□ -0.29
USP47-207ENST00000527733 SEMA5BQ9P283 1151 aa13.26□□□□□ -0.29
USP47-207ENST00000527733 C16orf97H3BN30 126 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 KLF7O75840 302 aaPredicted RBP13.25□□□□□ -0.29
USP47-207ENST00000527733 HIST1H1DP16402 221 aaKnown RBP13.25□□□□□ -0.29
USP47-207ENST00000527733 SNCAP37840 140 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 WNT2BQ93097 391 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 SIGLEC12Q96PQ1 595 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 NPIPB13A6NJU9 1138 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms