RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 FAM46BQ96A09 425 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 MRAP2Q96G30 205 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 C5orf30Q96GV9 206 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 ACY3Q96HD9 319 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 C12orf42Q96LP6 360 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 HARBI1Q96MB7 349 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 ZNF75AQ96N20 296 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 GUCD1Q96NT3 240 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 IP6K3Q96PC2 410 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 PEBP4Q96S96 227 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 MRPL45Q9BRJ2 306 aaKnown RBP3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 POLR2J2Q9GZM3 115 aaKnown RBP3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 ATG5Q9H1Y0 275 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 PLK3Q9H4B4 646 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 TMEM231Q9H6L2 316 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 TMEM185BQ9H7F4 350 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 WDR54Q9H977 334 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 RPF1Q9H9Y2 349 aaKnown RBP3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 ELL3Q9HB65 397 aaPredicted RBP3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 IL21RQ9HBE5 538 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 NOX4Q9NPH5 578 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 G6PC2Q9NQR9 355 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 PARP11Q9NR21 331 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 FKBP11Q9NYL4 201 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 NAT8Q9UHE5 227 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 TBX21Q9UL17 535 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 KCNK6Q9Y257 313 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 ASF1AQ9Y294 204 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 MEMO1Q9Y316 297 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 COQ4Q9Y3A0 265 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 URGCP-MRPS24S4R325 110 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 TSC2P49815 1807 aa3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 HELZP42694 1942 aaKnown RBP3.25□□□□□ -1.89
CLNS1A-209ENST00000527299 WDR90Q96KV7 1748 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 CACNA1SQ13698 1873 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 TNRC6CQ9HCJ0 1690 aaKnown RBP3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 NRXN3Q9Y4C0 1643 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 TMEM129A0AVI4 362 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 A1L4Q6 167 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 IGLON5A6NGN9 336 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 FBLL1A6NHQ2 334 aaKnown RBP3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 C4orf47A7E2U8 309 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 F8WDY8 70 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 GABARAPH6UMI1 98 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 J3QR06 171 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 AZIN1O14977 448 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 ARPC1BO15143 372 aaKnown RBP3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 ADAM20O43506 726 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 HCRTR1O43613 425 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 GNG7O60262 68 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 NDUFB6O95139 128 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 GJB5O95377 273 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 SLC16A8O95907 504 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 MT-ND4P03905 459 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 WNT1P04628 370 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 SERPIND1P05546 499 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 DCNP07585 359 aaKnown RBP3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 CT45A8P0DMV1 189 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 CT45A9P0DMV2 189 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 ESDP10768 282 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 PNMTP11086 282 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 ACP2P11117 423 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 GOT1P17174 413 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 ATF1P18846 271 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 CD22P20273 847 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 MAOAP21397 527 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 EDNRBP24530 442 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 CYP2F1P24903 491 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 S100GP29377 79 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 MIPP30301 263 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 DLSTP36957 453 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 CDKN2AP42771 156 aaKnown RBP3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 POLR2JP52435 117 aaKnown RBP3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 OC90Q02509 493 aaPredicted RBP3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 BCL2L1Q07817 233 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 AIMP2Q13155 320 aaKnown RBP3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 SRSF6Q13247 344 aaKnown RBP3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 ELOBQ15370 118 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 TMEM183BQ1AE95 376 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 FAM110CQ1W6H9 321 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 CCSMST1Q4G0I0 132 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 ZNF658BQ4V348 819 aaPredicted RBP3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 CT45A2Q5DJT8 189 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 PDZD11Q5EBL8 140 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 PHYHD1Q5SRE7 291 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 SLC27A1Q6PCB7 646 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 PODNL1Q6PEZ8 512 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 INO80CQ6PI98 192 aaPredicted RBP3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 TMEM220Q6QAJ8 160 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 WDR82Q6UXN9 313 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 CCDC117Q8IWD4 279 aaPredicted RBP3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 UBALD2Q8IYN6 164 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 BOD1L2Q8IYS8 172 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 WDTC1Q8N5D0 677 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 ZFP41Q8N8Y5 198 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 NHLRC2Q8NBF2 726 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 NECAP1Q8NC96 275 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 ST6GALNAC3Q8NDV1 305 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 OR10G3Q8NGC4 313 aa3.24□□□□□ -1.89
CLNS1A-209ENST00000527299 OR4D9Q8NGE8 314 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms