RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 RNF170Q96K19 258 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 OR14A2Q96R54 314 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 ADAT1Q9BUB4 502 aaKnown RBP9.07□□□□□ -0.96
NEDD8-205ENST00000527046 ITGB1BP2Q9UKP3 347 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 MYO9AB2RTY4 2548 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 CCDC168Q8NDH2 2452 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 CR1P17927 2039 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 TRAV8-7A0A075B6U6 113 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 MAGEA13PA6NCF6 341 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 ZNF732B4DXR9 585 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.06□□□□□ -0.96
NEDD8-205ENST00000527046 RHBDL1O75783 438 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 TNFAIP8O95379 198 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 GRPP07492 148 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 HSMCR30P0CW71 290 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 EGR1P18146 543 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 CFHR2P36980 270 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 SRP9P49458 86 aaKnown RBP9.06□□□□□ -0.96
NEDD8-205ENST00000527046 FABP5Q01469 135 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 ZNF181Q2M3W8 571 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 Q499Y3 187 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 ZMAT1Q5H9K5 638 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 FAM27D1Q5T7N8 215 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 SHEQ5VZ18 495 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 CD200R1LQ6Q8B3 271 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 WDR82Q6UXN9 313 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 KCTD8Q6ZWB6 473 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 MOGAT3Q86VF5 341 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 ZDHHC23Q8IYP9 409 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 GCSAMQ8N6F7 178 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 TSPAN14Q8NG11 270 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 OR13C3Q8NGS6 347 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 RPL3LQ92901 407 aaKnown RBP9.06□□□□□ -0.96
NEDD8-205ENST00000527046 TMEM203Q969S6 136 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 MUL1Q969V5 352 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 DERL3Q96Q80 235 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 COMMD4Q9H0A8 199 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 METTL17Q9H7H0 456 aaPredicted RBP9.06□□□□□ -0.96
NEDD8-205ENST00000527046 SAP30LQ9HAJ7 183 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 BARX1Q9HBU1 254 aaPredicted RBP9.06□□□□□ -0.96
NEDD8-205ENST00000527046 DECR2Q9NUI1 292 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 TMEM106BQ9NUM4 274 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 UFSP2Q9NUQ7 469 aa9.06□□□□□ -0.96
NEDD8-205ENST00000527046 A0A1W2PPK0 400 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 SHISA3A0PJX4 238 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 TRIM64BA6NI03 449 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 ZNF879B4DU55 563 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 F8VVB4 439 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 F8VWA3 439 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 TMEM178BH3BS89 294 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 FCN3O75636 299 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 CYB5R3P00387 301 aaPredicted RBP9.05□□□□□ -0.96
NEDD8-205ENST00000527046 ZNF12P17014 697 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 ADRA2CP18825 462 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 AMY2BP19961 511 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 TGFBR2P37173 567 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 GPM6AP51674 278 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 TMEM33P57088 247 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 ACSM3Q53FZ2 586 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 SPNS3Q6ZMD2 512 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 ANGPTL5Q86XS5 388 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 SERPINA12Q8IW75 414 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 SVOPQ8N4V2 548 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 MS4A15Q8N5U1 240 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 PP6455Q8WZ26 134 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 AQP3Q92482 292 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 CCL17Q92583 94 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 TMEM106AQ96A25 262 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 TMIGD2Q96BF3 282 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 SEH1LQ96EE3 360 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 Q96MF0 132 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 GFI1Q99684 422 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 TMED9Q9BVK6 235 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 ZCCHC4Q9H5U6 513 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 CHODLQ9H9P2 273 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 TMEM165Q9HC07 324 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 DLL4Q9NR61 685 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 TAS2R4Q9NYW5 299 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 DHDHQ9UQ10 334 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 PPP1R3CQ9UQK1 317 aa9.05□□□□□ -0.96
NEDD8-205ENST00000527046 A0A087WXM4 84 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 IGHV4-61A0A0C4DH41 118 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 IGKV1-12A0A0C4DH73 117 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 OR5B21A6NL26 309 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 CDIPTO14735 213 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 SYNGR1O43759 233 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 ZNF205O95201 554 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 IGKV1D-12P01611 117 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 IGHV2-70P01814 119 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 TFAP2AP05549 437 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 RPSAP08865 295 aaKnown RBP9.04□□□□□ -0.96
NEDD8-205ENST00000527046 OCM2P0CE71 109 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 TNFRSF1AP19438 455 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 TNFSF4P23510 183 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 MPZP25189 248 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 AZGP1P25311 298 aaKnown RBP9.04□□□□□ -0.96
NEDD8-205ENST00000527046 GNALP38405 381 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 NR4A2P43354 598 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 PDLIM4P50479 330 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 FUT6P51993 359 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms