RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 ERGIC3Q9Y282 383 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 SIRT4Q9Y6E7 314 aaPredicted RBP10.91□□□□□ -0.66
SMPD1-202ENST00000526280 MED13LQ71F56 2210 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 A6NIN4 97 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 CLDN25C9JDP6 229 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 MYL12BO14950 172 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 INMTO95050 263 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 NRASP01111 189 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 MT-ND2P03891 347 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 GRPP07492 148 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 FOSL1P15407 271 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 USF1P22415 310 aaPredicted RBP10.9□□□□□ -0.66
SMPD1-202ENST00000526280 RBMXP38159 391 aaKnown RBP10.9□□□□□ -0.66
SMPD1-202ENST00000526280 MAP2K4P45985 399 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 GP2P55259 537 aaKnown RBP10.9□□□□□ -0.66
SMPD1-202ENST00000526280 WNT4P56705 351 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 EMX1Q04741 257 aaPredicted RBP10.9□□□□□ -0.66
SMPD1-202ENST00000526280 LOXL1Q08397 574 aaPredicted RBP10.9□□□□□ -0.66
SMPD1-202ENST00000526280 IRF3Q14653 427 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 CDK5R1Q15078 307 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 ZNF181Q2M3W8 571 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 CEACAM21Q3KPI0 293 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 CEP78Q5JTW2 689 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 CLVS2Q5SYC1 327 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 MOB3CQ70IA8 216 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 WDR86Q86TI4 376 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 ZDHHC23Q8IYP9 409 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 OR51A4Q8NGJ6 313 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 OR10AC1Q8NH08 325 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 Q8TCH9 128 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 HPSE2Q8WWQ2 592 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 C18orf12Q96KH6 178 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 HIST1H2AAQ96QV6 131 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 PDCD1LG2Q9BQ51 273 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 RTL8AQ9BWD3 113 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 FGF23Q9GZV9 251 aaPredicted RBP10.9□□□□□ -0.66
SMPD1-202ENST00000526280 COMMD4Q9H0A8 199 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 TRIM36Q9NQ86 728 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 UFSP2Q9NUQ7 469 aa10.9□□□□□ -0.66
SMPD1-202ENST00000526280 IGHV4-61A0A0C4DH41 118 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 TMEM178BH3BS89 294 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 SMAD7O15105 426 aaKnown RBP10.89□□□□□ -0.67
SMPD1-202ENST00000526280 LMX1BO60663 402 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 THBS2P35442 1172 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 ZNF154Q13106 437 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 DOC2BQ14184 412 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 FAM76BQ5HYJ3 339 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 DMKNQ6E0U4 476 aaPredicted RBP10.89□□□□□ -0.67
SMPD1-202ENST00000526280 PRSS48Q7RTY5 328 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 C11orf53Q8IXP5 236 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 MAPK1IP1LQ8NDC0 245 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 OR1M1Q8NGA1 313 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 OR5A2Q8NGI9 324 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 RAB2BQ8WUD1 216 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 RAB1CQ92928 201 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 TIMD4Q96H15 378 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 RNF170Q96K19 258 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 MND1Q9BWT6 205 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 FN3KRPQ9HA64 309 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 PLEKHA1Q9HB21 404 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 LSM2Q9Y333 95 aaKnown RBP10.89□□□□□ -0.67
SMPD1-202ENST00000526280 WIPI2Q9Y4P8 454 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 NPTNQ9Y639 398 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 CR1P17927 2039 aa10.89□□□□□ -0.67
SMPD1-202ENST00000526280 MTORP42345 2549 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 YLPM1P49750 1951 aaKnown RBP10.88□□□□□ -0.67
SMPD1-202ENST00000526280 ANKRD61A6NGH8 418 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 TMEM210A6NLX4 147 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 LRRC30A6NM36 301 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 WNT9BO14905 357 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 INHBBP09529 407 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 GPM6AP51674 278 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 TAS2R43P59537 309 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 GNG3P63215 75 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 ACSM1Q08AH1 577 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 DMRTC1Q5HYR2 192 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 AVPI1Q5T686 147 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 PLCXD3Q63HM9 321 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 PEG10Q86TG7 708 aaKnown RBP10.88□□□□□ -0.67
SMPD1-202ENST00000526280 ANKRD13BQ86YJ7 626 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 OR13C3Q8NGS6 347 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 OR11L1Q8NGX0 322 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 HPS1Q92902 700 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 FGGYQ96C11 551 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 SMIM19Q96E16 107 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 ADAT3Q96EY9 351 aaPredicted RBP10.88□□□□□ -0.67
SMPD1-202ENST00000526280 DCUN1D5Q9BTE7 237 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 CHST5Q9GZS9 411 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 TLNRD1Q9H1K6 362 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 GPR173Q9NS66 373 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 C1orf123Q9NWV4 160 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 CSPG4Q6UVK1 2322 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 ZANQ9Y493 2812 aa10.88□□□□□ -0.67
SMPD1-202ENST00000526280 OR5B21A6NL26 309 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 A6NLC8 198 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 ZNF732B4DXR9 585 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 PLPP2O43688 288 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 CYB5R3P00387 301 aaPredicted RBP10.87□□□□□ -0.67
SMPD1-202ENST00000526280 SERPINA3P01011 423 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 IGHV2-70P01814 119 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms