RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 HPSE2Q8WWQ2 592 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 RPL3LQ92901 407 aaKnown RBP11.62□□□□□ -0.55
CPSF1-201ENST00000526271 FEVQ99581 238 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 DSCAML1Q8TD84 2053 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 TENM3Q9P273 2699 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 MEIOCA2RUB1 952 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 IDH3BO43837 385 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 ANXA8P13928 327 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 PRKACGP22612 351 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 DCTDP32321 178 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 ERVFRD-1P60508 538 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 GMFBP60983 142 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 CRMP1Q14194 572 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 MICBQ29980 383 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 OXLD1Q5BKU9 147 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 DPY19L4Q7Z388 723 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 ZDHHC13Q8IUH4 622 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 AQP11Q8NBQ7 271 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 BEND2Q8NDZ0 799 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 ANGPTL6Q8NI99 470 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 LYZL4Q96KX0 146 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 COPS4Q9BT78 406 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 GABARAPL1Q9H0R8 117 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 TRIM36Q9NQ86 728 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 CENPMQ9NSP4 180 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 IL20Q9NYY1 176 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 ZNF222Q9UK12 451 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 OAZ3Q9UMX2 235 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 NOP16Q9Y3C1 178 aaKnown RBP11.61□□□□□ -0.55
CPSF1-201ENST00000526271 FAM96BQ9Y3D0 163 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 MAB21L2Q9Y586 359 aa11.61□□□□□ -0.55
CPSF1-201ENST00000526271 H3BUX3 64 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 ZNF593O00488 134 aaPredicted RBP11.6□□□□□ -0.55
CPSF1-201ENST00000526271 SPARCP09486 303 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 ZNF823P16415 610 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 KIR2DS4P43632 304 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 CX3CR1P49238 355 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 GSK3AP49840 483 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 ENTPD1P49961 510 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 DAPP51397 102 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 LY6EQ16553 131 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 TEX30Q5JUR7 227 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 LDLRAD2Q5SZI1 272 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 FAHD1Q6P587 224 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 DYNAPQ8N1N2 210 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 PROKR2Q8NFJ6 384 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 NPRL2Q8WTW4 380 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 REEP6Q96HR9 211 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 DMRTB1Q96MA1 342 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 NIPSNAP1Q9BPW8 284 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 OSBPL10Q9BXB5 764 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 HAO2Q9NYQ3 351 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 NKX1-2Q9UD57 310 aaPredicted RBP11.6□□□□□ -0.55
CPSF1-201ENST00000526271 CDH10Q9Y6N8 788 aa11.6□□□□□ -0.55
CPSF1-201ENST00000526271 IGKV1D-17A0A075B6S4 117 aa11.59□□□□□ -0.55
CPSF1-201ENST00000526271 XRCC2O43543 280 aa11.59□□□□□ -0.55
CPSF1-201ENST00000526271 RHBDL1O75783 438 aa11.59□□□□□ -0.55
CPSF1-201ENST00000526271 SPI1P17947 270 aa11.59□□□□□ -0.55
CPSF1-201ENST00000526271 GABRA5P31644 462 aa11.59□□□□□ -0.55
CPSF1-201ENST00000526271 UBE2E1P51965 193 aa11.59□□□□□ -0.55
CPSF1-201ENST00000526271 ZNF121P58317 390 aaPredicted RBP11.59□□□□□ -0.55
CPSF1-201ENST00000526271 SLC34A1Q06495 639 aa11.59□□□□□ -0.55
CPSF1-201ENST00000526271 HABP2Q14520 560 aaPredicted RBP11.59□□□□□ -0.55
CPSF1-201ENST00000526271 FAM189A2Q15884 450 aa11.59□□□□□ -0.55
CPSF1-201ENST00000526271 FAM76BQ5HYJ3 339 aa11.59□□□□□ -0.55
CPSF1-201ENST00000526271 DMRTC1Q5HYR2 192 aa11.59□□□□□ -0.55
CPSF1-201ENST00000526271 KDM4DQ6B0I6 523 aa11.59□□□□□ -0.55
CPSF1-201ENST00000526271 RASSF6Q6ZTQ3 369 aa11.59□□□□□ -0.55
CPSF1-201ENST00000526271 KLHDC1Q8N7A1 406 aa11.59□□□□□ -0.55
CPSF1-201ENST00000526271 OR8S1Q8NH09 359 aa11.59□□□□□ -0.55
CPSF1-201ENST00000526271 C12orf43Q96C57 262 aaKnown RBP11.59□□□□□ -0.55
CPSF1-201ENST00000526271 MED20Q9H944 212 aa11.59□□□□□ -0.55
CPSF1-201ENST00000526271 SERTAD4Q9NUC0 356 aa11.59□□□□□ -0.55
CPSF1-201ENST00000526271 C14orf119Q9NWQ9 140 aa11.59□□□□□ -0.55
CPSF1-201ENST00000526271 ZNF391Q9UJN7 358 aa11.59□□□□□ -0.55
CPSF1-201ENST00000526271 SAC3D1A6NKF1 404 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 ANKRD30BLA7E2S9 258 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 ZNF878C9JN71 531 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 CASQ2O14958 399 aaPredicted RBP11.58□□□□□ -0.56
CPSF1-201ENST00000526271 SIGLEC5O15389 551 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 TBX1O43435 398 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 AKR7A2O43488 359 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 NDUFB3O43676 98 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 DDOSTP39656 456 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 OPRL1P41146 370 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 GUCA2AQ02747 115 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 CCBE1Q6UXH8 406 aaPredicted RBP11.58□□□□□ -0.56
CPSF1-201ENST00000526271 Q6ZS46 218 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 FAM57BQ71RH2 274 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 SLC36A1Q7Z2H8 476 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 GALNT4Q8N4A0 578 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 OR2T4Q8NH00 348 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 OR5R1Q8NH85 324 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 RNF133Q8WVZ7 376 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 DNAJC9Q8WXX5 260 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 OR5P3Q8WZ94 311 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 H1FXQ92522 213 aaKnown RBP11.58□□□□□ -0.56
CPSF1-201ENST00000526271 SLC29A1Q99808 456 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 CIB1Q99828 191 aa11.58□□□□□ -0.56
CPSF1-201ENST00000526271 SSX3Q99909 188 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms