RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 CNBD2Q96M20 576 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 IL4I1Q96RQ9 567 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 TEAD3Q99594 435 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 PITX2Q99697 317 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 SFXN3Q9BWM7 321 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 LINC00470Q9BZP3 86 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 OR51V1Q9H2C8 321 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 HRH4Q9H3N8 390 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 PIGMQ9H3S5 423 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 FN3KQ9H479 309 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 PLK3Q9H4B4 646 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 SEBOXQ9HB31 216 aaPredicted RBP3.84□□□□□ -1.79
USP48-211ENST00000526044 CMC2Q9NRP2 79 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 SLC7A10Q9NS82 523 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 FAM212BQ9NTI7 297 aaPredicted RBP3.84□□□□□ -1.79
USP48-211ENST00000526044 CLN6Q9NWW5 311 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 ZNF226Q9NYT6 803 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 UBAP1Q9NZ09 502 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 GLTPQ9NZD2 209 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 RALYQ9UKM9 306 aaKnown RBP3.84□□□□□ -1.79
USP48-211ENST00000526044 B9D1Q9UPM9 204 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 MOKQ9UQ07 419 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 RNF6Q9Y252 685 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 CHTOPQ9Y3Y2 248 aaKnown RBP3.84□□□□□ -1.79
USP48-211ENST00000526044 ATMQ13315 3056 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 IGF2RP11717 2491 aa3.84□□□□□ -1.8
USP48-211ENST00000526044 MAP1BP46821 2468 aaKnown RBP3.83□□□□□ -1.8
USP48-211ENST00000526044 ANKRD11Q6UB99 2663 aaPredicted RBP3.83□□□□□ -1.8
USP48-211ENST00000526044 A0A1W2PS18 150 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 CIB4A0PJX0 185 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 OOEPA6NGQ2 149 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 FAM183AA6NL82 134 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 ANXA2P2A6NMY6 339 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 RPL36A-HNRNPH2H7BZ11 118 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 ENTPD6O75354 484 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 MTRF1O75570 445 aaKnown RBP3.83□□□□□ -1.8
USP48-211ENST00000526044 GLCEO94923 617 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 CGAP01215 116 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 IGKV3-20P01619 116 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 GYPBP06028 91 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 GNAO1P09471 354 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 CLUP10909 449 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 ZNF823P16415 610 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 SPI1P17947 270 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 NPR2P20594 1047 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 EDNRAP25101 427 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 LAP3P28838 519 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 CHRNB4P30926 498 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 FMO3P31513 532 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 PYCR1P32322 319 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 UQCRFS1P47985 274 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 ZNF133P52736 654 aaPredicted RBP3.83□□□□□ -1.8
USP48-211ENST00000526044 BLVRAP53004 296 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 TGFBR3Q03167 851 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 HSF2Q03933 536 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 GLO1Q04760 184 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 MZT1Q08AG7 82 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 APOFQ13790 326 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 MAD2L1BPQ15013 274 aaPredicted RBP3.83□□□□□ -1.8
USP48-211ENST00000526044 P2RY6Q15077 328 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 GUSBP1Q15486 140 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 STK11Q15831 433 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 SGCAQ16586 387 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 CEACAM16Q2WEN9 425 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 AARDQ4LEZ3 155 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 SLC35D3Q5M8T2 416 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 SLC25A30Q5SVS4 291 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 AADACL4Q5VUY2 407 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 NXNL2Q5VZ03 156 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 XKRXQ6PP77 449 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 TFAP2EQ6VUC0 442 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 NCCRP1Q6ZVX7 275 aaPredicted RBP3.83□□□□□ -1.8
USP48-211ENST00000526044 GID4Q8IVV7 300 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 SERPINA12Q8IW75 414 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 WDFY1Q8IWB7 410 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 ENTHD1Q8IYW4 607 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 NOXO1Q8NFA2 376 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 PROKR2Q8NFJ6 384 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 OR51L1Q8NGJ5 315 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 OR9Q1Q8NGQ5 310 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 LILRB4Q8NHJ6 448 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 CA5BP1Q8WTZ4 195 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 ZNRF4Q8WWF5 429 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 PIGTQ969N2 578 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 C5orf30Q96GV9 206 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 ZNF582Q96NG8 517 aaPredicted RBP3.83□□□□□ -1.8
USP48-211ENST00000526044 TSSK2Q96PF2 358 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 ANKRD60Q9BZ19 345 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 ULBP2Q9BZM5 246 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 NMNAT2Q9BZQ4 307 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 CSTL1Q9H114 145 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 OPN3Q9H1Y3 402 aaPredicted RBP3.83□□□□□ -1.8
USP48-211ENST00000526044 SYT4Q9H2B2 425 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 MED20Q9H944 212 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 RANGRFQ9HD47 186 aaPredicted RBP3.83□□□□□ -1.8
USP48-211ENST00000526044 WARS2Q9UGM6 360 aaKnown RBP3.83□□□□□ -1.8
USP48-211ENST00000526044 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.83□□□□□ -1.8
USP48-211ENST00000526044 RPL36Q9Y3U8 105 aaKnown RBP3.83□□□□□ -1.8
USP48-211ENST00000526044 FKBP7Q9Y680 259 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 MYO7BQ6PIF6 2116 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms