RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 ZNF701Q9NV72 531 aaPredicted RBP5.48□□□□□ -1.53
CD44-214ENST00000525211 ZNF281Q9Y2X9 895 aa5.48□□□□□ -1.53
CD44-214ENST00000525211 VPS13CQ709C8 3753 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 MED13LQ71F56 2210 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 CCDC168Q8NDH2 2452 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 IGKV1-12A0A0C4DH73 117 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 SMIM30A4D0T7 59 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 TMEM212A6NML5 194 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 F8VVB4 439 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 F8VWA3 439 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 H7C417 338 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 M0R233 179 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 SYNGR1O43759 233 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 MRPS14O60783 128 aaKnown RBP5.47□□□□□ -1.53
CD44-214ENST00000525211 FCN3O75636 299 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 RHBDL1O75783 438 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 CST4P01036 141 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 NRASP01111 189 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 IGKV1D-12P01611 117 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 APOC1P02654 83 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 RAF1P04049 648 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 CD1AP06126 327 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 GRPP07492 148 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 CLEC2LP0C7M8 214 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 UBCP0CG48 685 aaKnown RBP5.47□□□□□ -1.53
CD44-214ENST00000525211 CALCBP10092 127 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 IGFBP3P17936 291 aaPredicted RBP5.47□□□□□ -1.53
CD44-214ENST00000525211 GADD45AP24522 165 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 PPOXP50336 477 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 GPM6AP51674 278 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 ID3Q02535 119 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 ZNF154Q13106 437 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 OR8G1Q15617 311 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 DEFB113Q30KQ7 82 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 CCDC58Q4VC31 144 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 ACSM3Q53FZ2 586 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 SYT6Q5T7P8 510 aaPredicted RBP5.47□□□□□ -1.53
CD44-214ENST00000525211 ZNF529Q6P280 563 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 DOK3Q7L591 496 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 C1QL2Q7Z5L3 287 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 LRRTM1Q86UE6 522 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 CDH24Q86UP0 819 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 MOGAT3Q86VF5 341 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 NR2C2APQ86WQ0 139 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 LYPD6Q86Y78 171 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 CALHM1Q8IU99 346 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 ZNF525Q8N782 197 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 DNAAF1Q8NEP3 725 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 OR13C3Q8NGS6 347 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 OR13C9Q8NGT0 318 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 OR5P3Q8WZ94 311 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 OR2V2Q96R30 315 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 ADAT1Q9BUB4 502 aaKnown RBP5.47□□□□□ -1.53
CD44-214ENST00000525211 PAPOLGQ9BWT3 736 aaKnown RBP5.47□□□□□ -1.53
CD44-214ENST00000525211 KCNK15Q9H427 330 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 DYNLRB1Q9NP97 96 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 ISYNA1Q9NPH2 558 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 TRIM36Q9NQ86 728 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 UFSP2Q9NUQ7 469 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 ZNF581Q9P0T4 197 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 BLOC1S6Q9UL45 172 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 HHLA2Q9UM44 414 aa5.47□□□□□ -1.53
CD44-214ENST00000525211 ZNF469Q96JG9 3925 aaPredicted RBP5.47□□□□□ -1.53
CD44-214ENST00000525211 ANK3Q12955 4377 aaKnown RBP5.46□□□□□ -1.53
CD44-214ENST00000525211 IGHV4-30-2A0A087WSY4 118 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 A0A087WXM4 84 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 A0A096LNT2 108 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 ZNF816-ZNF321PA0A0X1KG74 233 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 A0A1B0GW55 424 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 FAM230AA0A1W2PPH8 454 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 PQLC2LA1A4F0 135 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 ZNF879B4DU55 563 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 ZNF732B4DXR9 585 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.46□□□□□ -1.54
CD44-214ENST00000525211 GABRPO00591 440 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 SSX4O60224 188 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 ALX3O95076 343 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 HTR3BO95264 441 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 CYB5R3P00387 301 aaPredicted RBP5.46□□□□□ -1.54
CD44-214ENST00000525211 CD55P08174 381 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 ADH4P08319 380 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 DUX4L2P0CJ85 424 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 DUX4L3P0CJ86 424 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 DUX4L4P0CJ87 422 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 DUX4L5P0CJ88 424 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 DUX4L6P0CJ89 424 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 DUX4L7P0CJ90 424 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 ATF1P18846 271 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 AMY2BP19961 511 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 CD80P33681 288 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 DDOSTP39656 456 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 CD200P41217 278 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 CAV3P56539 151 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 OR10A3P58181 314 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 GMFBP60983 142 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 SNRPD2P62316 118 aaKnown RBP5.46□□□□□ -1.54
CD44-214ENST00000525211 TNFAIP6P98066 277 aaPredicted RBP5.46□□□□□ -1.54
CD44-214ENST00000525211 BDH1Q02338 343 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 RIPPLY1Q0D2K3 151 aa5.46□□□□□ -1.54
CD44-214ENST00000525211 PLA2G7Q13093 441 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms