RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 OR10Z1Q8NGY1 313 aa10.54□□□□□ -0.72
VEGFA-225ENST00000523950 HPSE2Q8WWQ2 592 aa10.54□□□□□ -0.72
VEGFA-225ENST00000523950 RNF166Q96A37 237 aaPredicted RBP10.54□□□□□ -0.72
VEGFA-225ENST00000523950 RNF170Q96K19 258 aa10.54□□□□□ -0.72
VEGFA-225ENST00000523950 TMEM165Q9HC07 324 aa10.54□□□□□ -0.72
VEGFA-225ENST00000523950 C1orf123Q9NWV4 160 aa10.54□□□□□ -0.72
VEGFA-225ENST00000523950 CHCHD3Q9NX63 227 aaKnown RBP10.54□□□□□ -0.72
VEGFA-225ENST00000523950 UBAP1Q9NZ09 502 aa10.54□□□□□ -0.72
VEGFA-225ENST00000523950 MIOXQ9UGB7 285 aa10.54□□□□□ -0.72
VEGFA-225ENST00000523950 CDC42EP3Q9UKI2 254 aa10.54□□□□□ -0.72
VEGFA-225ENST00000523950 DIMT1Q9UNQ2 313 aaKnown RBP10.54□□□□□ -0.72
VEGFA-225ENST00000523950 CAB39Q9Y376 341 aaPredicted RBP10.54□□□□□ -0.72
VEGFA-225ENST00000523950 EXOSC1Q9Y3B2 195 aaKnown RBP10.54□□□□□ -0.72
VEGFA-225ENST00000523950 TRAV38-1A0A0B4J264 116 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 PPIAL4CA0A0B4J2A2 164 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 IGHV3-64DA0A0J9YX35 117 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 LOC107986453A0A1B0GWG9 222 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 hCG_1807616A0A1W2PRN6 198 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 CEACAM18A8MTB9 384 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 A8MXK9 166 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 LGALS8O00214 317 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 NDUFA2O43678 99 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 GATBO75879 557 aaKnown RBP10.53□□□□□ -0.72
VEGFA-225ENST00000523950 NRASP01111 189 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 LHBP01229 141 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 GNAO1P09471 354 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 LIMS3P0CW19 117 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 LIMS4P0CW20 117 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 HNF1AP20823 631 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 THBS2P35442 1172 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 KIR3DL2P43630 455 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 GBX2P52951 348 aaPredicted RBP10.53□□□□□ -0.72
VEGFA-225ENST00000523950 ALKBH1Q13686 389 aaKnown RBP10.53□□□□□ -0.72
VEGFA-225ENST00000523950 PLCXD3Q63HM9 321 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 WDR82Q6UXN9 313 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 KCTD8Q6ZWB6 473 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 MOB3CQ70IA8 216 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 NLRC3Q7RTR2 1065 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 C11orf53Q8IXP5 236 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 GCSAMQ8N6F7 178 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 PP6455Q8WZ26 134 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 TMEM186Q96B77 213 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 TMEM80Q96HE8 168 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 YTHDF1Q9BYJ9 559 aaKnown RBP10.53□□□□□ -0.72
VEGFA-225ENST00000523950 ANKRD60Q9BZ19 345 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 FRRS1LQ9P0K9 344 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 HHLA2Q9UM44 414 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 MALRD1Q5VYJ5 2156 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 HIVEP2P31629 2446 aa10.53□□□□□ -0.72
VEGFA-225ENST00000523950 TEP1Q99973 2627 aaKnown RBP10.53□□□□□ -0.72
VEGFA-225ENST00000523950 CSPG4Q6UVK1 2322 aa10.52□□□□□ -0.72
VEGFA-225ENST00000523950 ABCA2Q9BZC7 2435 aa10.52□□□□□ -0.73
VEGFA-225ENST00000523950 ANKRD61A6NGH8 418 aa10.52□□□□□ -0.73
VEGFA-225ENST00000523950 OOEPA6NGQ2 149 aa10.52□□□□□ -0.73
VEGFA-225ENST00000523950 TMEM212A6NML5 194 aa10.52□□□□□ -0.73
VEGFA-225ENST00000523950 OR4C45A6NMZ5 311 aa10.52□□□□□ -0.73
VEGFA-225ENST00000523950 CRLF1O75462 422 aa10.52□□□□□ -0.73
VEGFA-225ENST00000523950 SERPINA3P01011 423 aa10.52□□□□□ -0.73
VEGFA-225ENST00000523950 RPS2P15880 293 aaKnown RBP10.52□□□□□ -0.73
VEGFA-225ENST00000523950 GATA3P23771 443 aa10.52□□□□□ -0.73
VEGFA-225ENST00000523950 NANOS3P60323 173 aaKnown RBP10.52□□□□□ -0.73
VEGFA-225ENST00000523950 KCTD21Q4G0X4 260 aa10.52□□□□□ -0.73
VEGFA-225ENST00000523950 CCDC58Q4VC31 144 aa10.52□□□□□ -0.73
VEGFA-225ENST00000523950 CEP78Q5JTW2 689 aa10.52□□□□□ -0.73
VEGFA-225ENST00000523950 TEX36Q5VZQ5 186 aa10.52□□□□□ -0.73
VEGFA-225ENST00000523950 TEX29Q8N6K0 151 aa10.52□□□□□ -0.73
VEGFA-225ENST00000523950 OR52N1Q8NH53 320 aa10.52□□□□□ -0.73
VEGFA-225ENST00000523950 C12orf43Q96C57 262 aaKnown RBP10.52□□□□□ -0.73
VEGFA-225ENST00000523950 NEIL1Q96FI4 390 aaPredicted RBP10.52□□□□□ -0.73
VEGFA-225ENST00000523950 TMEM246Q9BRR3 403 aa10.52□□□□□ -0.73
VEGFA-225ENST00000523950 CHST5Q9GZS9 411 aa10.52□□□□□ -0.73
VEGFA-225ENST00000523950 COMMD4Q9H0A8 199 aa10.52□□□□□ -0.73
VEGFA-225ENST00000523950 PPP1R3EQ9H7J1 279 aa10.52□□□□□ -0.73
VEGFA-225ENST00000523950 ISG20L2Q9H9L3 353 aaKnown RBP10.52□□□□□ -0.73
VEGFA-225ENST00000523950 PTTG2Q9NZH5 202 aa10.52□□□□□ -0.73
VEGFA-225ENST00000523950 POLR3KQ9Y2Y1 108 aaPredicted RBP10.52□□□□□ -0.73
VEGFA-225ENST00000523950 SRRM5B3KS81 715 aa10.51□□□□□ -0.73
VEGFA-225ENST00000523950 ZNF732B4DXR9 585 aa10.51□□□□□ -0.73
VEGFA-225ENST00000523950 J3QLI3 93 aa10.51□□□□□ -0.73
VEGFA-225ENST00000523950 CDIPTO14735 213 aa10.51□□□□□ -0.73
VEGFA-225ENST00000523950 WNT2P09544 360 aa10.51□□□□□ -0.73
VEGFA-225ENST00000523950 MUC1P15941 1255 aaPredicted RBP10.51□□□□□ -0.73
VEGFA-225ENST00000523950 NPY4RP50391 375 aa10.51□□□□□ -0.73
VEGFA-225ENST00000523950 ETV1P50549 477 aa10.51□□□□□ -0.73
VEGFA-225ENST00000523950 GPM6AP51674 278 aa10.51□□□□□ -0.73
VEGFA-225ENST00000523950 CNN3Q15417 329 aaKnown RBP10.51□□□□□ -0.73
VEGFA-225ENST00000523950 ODF4Q2M2E3 257 aa10.51□□□□□ -0.73
VEGFA-225ENST00000523950 CHRFAM7AQ494W8 412 aa10.51□□□□□ -0.73
VEGFA-225ENST00000523950 ESCO2Q56NI9 601 aa10.51□□□□□ -0.73
VEGFA-225ENST00000523950 LAIR2Q6ISS4 152 aa10.51□□□□□ -0.73
VEGFA-225ENST00000523950 RPL22L1Q6P5R6 122 aaKnown RBP10.51□□□□□ -0.73
VEGFA-225ENST00000523950 ZNF826PQ6ZT77 177 aa10.51□□□□□ -0.73
VEGFA-225ENST00000523950 ZNF573Q86YE8 665 aa10.51□□□□□ -0.73
VEGFA-225ENST00000523950 ZNF676Q8N7Q3 588 aa10.51□□□□□ -0.73
VEGFA-225ENST00000523950 SCCPDHQ8NBX0 429 aa10.51□□□□□ -0.73
VEGFA-225ENST00000523950 OR8B3Q8NGG8 313 aa10.51□□□□□ -0.73
VEGFA-225ENST00000523950 ZNF671Q8TAW3 534 aa10.51□□□□□ -0.73
VEGFA-225ENST00000523950 LRRC29Q8WV35 223 aa10.51□□□□□ -0.73
VEGFA-225ENST00000523950 GGHQ92820 318 aa10.51□□□□□ -0.73
VEGFA-225ENST00000523950 OR8B2Q96RD0 313 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms