RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 MRPS18AQ9NVS2 196 aaKnown RBP11.59□□□□□ -0.55
PCDHGB1-201ENST00000523390 AQP8O94778 261 aa11.59□□□□□ -0.55
PCDHGB1-201ENST00000523390 RAB6AP20340 208 aa11.59□□□□□ -0.55
PCDHGB1-201ENST00000523390 NME2P22392 152 aa11.59□□□□□ -0.55
PCDHGB1-201ENST00000523390 RAB31Q13636 194 aa11.59□□□□□ -0.55
PCDHGB1-201ENST00000523390 CLDN23Q96B33 292 aa11.59□□□□□ -0.55
PCDHGB1-201ENST00000523390 MDC1Q14676 2089 aaKnown RBP11.58□□□□□ -0.55
PCDHGB1-201ENST00000523390 TMEM127O75204 238 aa11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 BRICD5Q6PL45 260 aa11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 LYPD8Q6UX82 237 aa11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 CNTNAP3BQ96NU0 1288 aa11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 A0A1B0GUH1 482 aa11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 MEX3AA1L020 520 aaKnown RBP11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 ZIC2O95409 532 aaPredicted RBP11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 RPS4Y1P22090 263 aaKnown RBP11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 CA6P23280 308 aa11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 NANOS3P60323 173 aaKnown RBP11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 IGLV3-21P80748 117 aaPredicted RBP11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 SLC30A7Q8NEW0 376 aa11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 UQCC2Q9BRT2 126 aa11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 FZR1Q9UM11 496 aa11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 IGHV1-45A0A0A0MS14 117 aa11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 NKX6-3A6NJ46 265 aa11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 GDF9O60383 454 aa11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 GLAP06280 429 aa11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 GP1BAP07359 652 aa11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 FTH1P19P0C7X4 201 aa11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 RHEBQ15382 184 aa11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 FAM181AQ8N9Y4 354 aa11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 SCCPDHQ8NBX0 429 aa11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 SF3B5Q9BWJ5 86 aaKnown RBP11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 TGIF2Q9GZN2 237 aa11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 ZNF230Q9UIE0 474 aaPredicted RBP11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 COL4A6Q14031 1691 aa11.58□□□□□ -0.56
PCDHGB1-201ENST00000523390 LNP1A1A4G5 178 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 ENSAO43768 121 aaKnown RBP11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 DXOO77932 396 aaKnown RBP11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 PXDC1Q5TGL8 231 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 RGS7BPQ6MZT1 257 aaPredicted RBP11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 TCTEX1D2Q8WW35 142 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 ARPC5LQ9BPX5 153 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 PLEKHF2Q9H8W4 249 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 PLEKHA3Q9HB20 300 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 MTFP1Q9UDX5 166 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 SERPINE3A8MV23 424 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 RAB27BO00194 218 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 IGKV3-11P04433 115 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 GNG3P63215 75 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 LRRTM1Q86UE6 522 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 SLC51BQ86UW2 128 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 EXTL1Q92935 676 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 LOXL4Q96JB6 756 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 ADAM19Q9H013 955 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 COL6A6A6NMZ7 2263 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 CTXN2P0C2S0 81 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 TBPP20226 339 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 SNCAP37840 140 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 GZMKP49863 264 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 LSM6P62312 80 aaKnown RBP11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 SLC23A3Q6PIS1 610 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 MAP6Q96JE9 813 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 TMEM100Q9NV29 134 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 PPP1R3CQ9UQK1 317 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 FUT3P21217 361 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 F2RL1P55085 397 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 P2RX3P56373 397 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 C6orf201Q7Z4U5 140 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 TERB2Q8NHR7 220 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 MED30Q96HR3 178 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 ZNF649Q9BS31 505 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 KCNJ16Q9NPI9 418 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 PRMT8Q9NR22 394 aaPredicted RBP11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 PRELID3BQ9Y3B1 194 aa11.57□□□□□ -0.56
PCDHGB1-201ENST00000523390 PRDX4Q13162 271 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 C22orf15Q8WYQ4 148 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 FBXO7Q9Y3I1 522 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 IFNA10P01566 189 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 HIST1H1DP16402 221 aaKnown RBP11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 AKAP6Q13023 2319 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 ESCO2Q56NI9 601 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 CREB3L2Q70SY1 520 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 TMUB2Q71RG4 321 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 TMEM229BQ8NBD8 167 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 RNF133Q8WVZ7 376 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 RTN4IP1Q8WWV3 396 aaPredicted RBP11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 ST8SIA4Q92187 359 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 CMTM3Q96MX0 182 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 AMELYQ99218 206 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 ADAT1Q9BUB4 502 aaKnown RBP11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 IL17BQ9UHF5 180 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 LSM2Q9Y333 95 aaKnown RBP11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 CSAG2Q9Y5P2 127 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 OR5H14A6NHG9 310 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 NKX2-8O15522 239 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 SPRY3O43610 288 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 CATSPERDQ86XM0 798 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 ASB5Q8WWX0 329 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 YIPF5Q969M3 257 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 ST6GALNAC2Q9UJ37 374 aa11.56□□□□□ -0.56
PCDHGB1-201ENST00000523390 ST8SIA3O43173 380 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 221.3 ms