RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 MRM2Q9UI43 246 aaKnown RBP12.35□□□□□ -0.43
SYNPO-205ENST00000522122 ZNF727A8MUV8 499 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 PTAFRP25105 342 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 FUT6P51993 359 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 PSG6Q00889 435 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 ZNF92Q03936 586 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 CEACAM16Q2WEN9 425 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 PRAMEF5Q5TYX0 476 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 PRAMEF6Q5VXH4 476 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 LRRTM1Q86UE6 522 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 SFTPA1Q8IWL2 248 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 FAM185AQ8N0U4 392 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 AKR7LQ8NHP1 331 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 CMBLQ96DG6 245 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 PGLYRP3Q96LB9 341 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 CCDC74BQ96LY2 380 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 ALKBH3Q96Q83 286 aaPredicted RBP12.34□□□□□ -0.43
SYNPO-205ENST00000522122 IGKV1-8A0A0C4DH67 115 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 HIST1H1DP16402 221 aaKnown RBP12.34□□□□□ -0.43
SYNPO-205ENST00000522122 ZDHHC23Q8IYP9 409 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 F6UZH7 168 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 MOSPD3O75425 235 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 SCAF4O95104 1147 aaKnown RBP12.34□□□□□ -0.43
SYNPO-205ENST00000522122 RAB4AP20338 218 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 PEBP1P30086 187 aaKnown RBP12.34□□□□□ -0.43
SYNPO-205ENST00000522122 KISS1Q15726 138 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 BAGE3Q86Y29 109 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 BAGE2Q86Y30 109 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 NPEPL1Q8NDH3 523 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 UFSP2Q9NUQ7 469 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 SPRY1O43609 319 aaPredicted RBP12.34□□□□□ -0.43
SYNPO-205ENST00000522122 POU2F2P09086 479 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 ANKRD34CP0C6C1 535 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 CCL11P51671 97 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 DHODHQ02127 395 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 HYAL1Q12794 435 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 SLC10A1Q14973 349 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 THNSL2Q86YJ6 484 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 FBXL14Q8N1E6 418 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 ARHGAP5-AS1Q96IT6 56 aa12.34□□□□□ -0.43
SYNPO-205ENST00000522122 KLF13Q9Y2Y9 288 aaPredicted RBP12.34□□□□□ -0.43
SYNPO-205ENST00000522122 SIRPB1O00241 398 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 RER1O15258 196 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 SELEP16581 610 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 COL9A1P20849 921 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 DSCR4P56555 118 aaPredicted RBP12.33□□□□□ -0.44
SYNPO-205ENST00000522122 PPP1CAP62136 330 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 ISXQ2M1V0 245 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 CDC20BQ86Y33 519 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 RBMXL3Q8N7X1 1067 aaKnown RBP12.33□□□□□ -0.44
SYNPO-205ENST00000522122 PRRX2Q99811 253 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 CHST6Q9GZX3 395 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 IGHV3-64DA0A0J9YX35 117 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 GABRA1P14867 456 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 FUT3P21217 361 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 OR8B8Q15620 311 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 OR1L3Q8NH93 324 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 ROBO4Q8WZ75 1007 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 PHYHIPLQ96FC7 376 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 GREB1Q4ZG55 1949 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 PRSS44E7EML9 344 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 ZNF468Q5VIY5 522 aaPredicted RBP12.33□□□□□ -0.44
SYNPO-205ENST00000522122 TDHQ8IZJ6 230 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 BPIFCQ8NFQ6 507 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 OR10P1Q8NGE3 313 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 LHFPL5Q8TAF8 219 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 C1QTNF6Q9BXI9 259 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 DOCK4Q8N1I0 1966 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 IL34Q6ZMJ4 242 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 ZNF561Q8N587 486 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 OIT3Q8WWZ8 545 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 VSTM2LQ96N03 204 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 FOXB1Q99853 325 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 PCED1AQ9H1Q7 454 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 RAB18Q9NP72 206 aa12.33□□□□□ -0.44
SYNPO-205ENST00000522122 LIN7CQ9NUP9 197 aaKnown RBP12.33□□□□□ -0.44
SYNPO-205ENST00000522122 FIGNL2A6NMB9 653 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 ENSAO43768 121 aaKnown RBP12.32□□□□□ -0.44
SYNPO-205ENST00000522122 S100A8P05109 93 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 FUT7Q11130 342 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 TMEM92Q6UXU6 159 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 OR5M8Q8NGP6 311 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 OR2V1Q8NHB1 315 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 RXFP4Q8TDU9 374 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 GABRG3Q99928 467 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 ADAM19Q9H013 955 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 CA10Q9NS85 328 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 OPN4Q9UHM6 478 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 RPH3ALQ9UNE2 315 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 CENPVL1A0A0U1RR11 272 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 RNASEK-C17orf49H0YIS7 233 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 FAM199XQ6PEV8 388 aaPredicted RBP12.32□□□□□ -0.44
SYNPO-205ENST00000522122 OR1J1Q8NGS3 322 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 OR1F12Q8NHA8 337 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 DEFB127Q9H1M4 99 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 ICAM5Q9UMF0 924 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 CST4P01036 141 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 PTGFRP43088 359 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 INSM1Q01101 510 aaPredicted RBP12.32□□□□□ -0.44
SYNPO-205ENST00000522122 SP6Q3SY56 376 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms