RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 MMP27Q9H306 513 aa7.65□□□□□ -1.18
CSMD1-208ENST00000520561 LIN7BQ9HAP6 207 aa7.65□□□□□ -1.18
CSMD1-208ENST00000520561 DYNLRB1Q9NP97 96 aa7.65□□□□□ -1.18
CSMD1-208ENST00000520561 CISD1Q9NZ45 108 aaKnown RBP7.65□□□□□ -1.18
CSMD1-208ENST00000520561 PLEKHB1Q9UF11 243 aaPredicted RBP7.65□□□□□ -1.18
CSMD1-208ENST00000520561 ADAM30Q9UKF2 790 aa7.65□□□□□ -1.18
CSMD1-208ENST00000520561 MRPS28Q9Y2Q9 187 aaKnown RBP7.65□□□□□ -1.18
CSMD1-208ENST00000520561 SMG1Q96Q15 3661 aaKnown RBP7.65□□□□□ -1.19
CSMD1-208ENST00000520561 PQLC2LA1A4F0 135 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 A6NNC1 897 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 ZNF732B4DXR9 585 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 E7EQL1 145 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 M0R233 179 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 RGS5O15539 181 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 BPNT1O95861 308 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 CYB5AP00167 134 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 PLAUP00749 431 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 UBBP0CG47 229 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 CALCBP10092 127 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 COX6B1P14854 86 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 TNFSF4P23510 183 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 LOXP28300 417 aaPredicted RBP7.64□□□□□ -1.19
CSMD1-208ENST00000520561 APOBEC3AP31941 199 aaPredicted RBP7.64□□□□□ -1.19
CSMD1-208ENST00000520561 SERPINF1P36955 418 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 OR3A4PP47883 348 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 EVX1P49640 407 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 ZNF81P51508 661 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 GPM6AP51674 278 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 SCAND1P57086 179 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 SNRPD2P62316 118 aaKnown RBP7.64□□□□□ -1.19
CSMD1-208ENST00000520561 SRSF1Q07955 248 aaKnown RBP eCLIP7.64□□□□□ -1.19
CSMD1-208ENST00000520561 RIN1Q13671 783 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 DAZAP2Q15038 168 aaPredicted RBP7.64□□□□□ -1.19
CSMD1-208ENST00000520561 P2RY14Q15391 338 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 EFNB3Q15768 340 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 DMRTC1Q5HYR2 192 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 TMEM255AQ5JRV8 349 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 C1orf100Q5SVJ3 147 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 FBXL14Q8N1E6 418 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 ACBD4Q8NC06 268 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 OR2Z1Q8NG97 314 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 OR10AD1Q8NGE0 317 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 OR5D18Q8NGL1 313 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 LGALS14Q8TCE9 139 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 TNFAIP8L1Q8WVP5 186 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 NEUROG1Q92886 237 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 ELMOD3Q96FG2 381 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 NKX3-1Q99801 234 aaPredicted RBP7.64□□□□□ -1.19
CSMD1-208ENST00000520561 NXF2Q9GZY0 626 aaKnown RBP7.64□□□□□ -1.19
CSMD1-208ENST00000520561 CXXC4Q9H2H0 198 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 PPP1R3EQ9H7J1 279 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 CNTD2Q9H8S5 307 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 MSL2Q9HCI7 577 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 FAIMQ9NVQ4 179 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 C14orf119Q9NWQ9 140 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 MYEF2Q9P2K5 600 aaKnown RBP7.64□□□□□ -1.19
CSMD1-208ENST00000520561 COMMD3Q9UBI1 195 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 PEX16Q9Y5Y5 336 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 ETV7Q9Y603 341 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 PMF1-BGLAPU3KQ54 211 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 ANKHD1Q8IWZ3 2542 aaKnown RBP7.64□□□□□ -1.19
CSMD1-208ENST00000520561 NBEAQ8NFP9 2946 aa7.64□□□□□ -1.19
CSMD1-208ENST00000520561 PRR14LQ5THK1 2151 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 CFAP46Q8IYW2 2715 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 A0A0B4J203 849 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 LOC100289279A0A1B0GTE1 492 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 A1L4Q6 167 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 LRP5LA4QPB2 252 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 CLEC18AA5D8T8 446 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 ZSCAN5BA6NJL1 495 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 A6NLC8 198 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 B9A039 149 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 J3QT63 122 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 HS3ST1O14792 307 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 MLNRO43193 412 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 SPRY3O43610 288 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 PLATP00750 562 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 TMEM225BP0DP42 221 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 CD37P11049 281 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 SNRPBP14678 240 aaKnown RBP7.63□□□□□ -1.19
CSMD1-208ENST00000520561 ARSBP15848 533 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 THBS2P35442 1172 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 ALDH3B1P43353 468 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 HAAOP46952 286 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 MMP15P51511 669 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 CLDN12P56749 244 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 GLIPR1L1Q6UWM5 242 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 CLEC18BQ6UXF7 455 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 Q6ZR03 302 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 ANGPTL5Q86XS5 388 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 LYPD6Q86Y78 171 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 ZNF573Q86YE8 665 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 MUC15Q8N387 334 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 ZNF611Q8N823 705 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 SAMD12Q8N8I0 201 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 CLEC18CQ8NCF0 446 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 OR4D6Q8NGJ1 314 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 FAM3DQ96BQ1 224 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 DIRC2Q96SL1 478 aa7.63□□□□□ -1.19
CSMD1-208ENST00000520561 TSC22D3Q99576 134 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms