RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 ATP5HO75947 161 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 FARS2O95363 451 aaKnown RBP5.8□□□□□ -1.48
SDCBP-208ENST00000520228 IGLV1-44P01699 117 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 IGHV4-59P01825 116 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 IGHMP01871 453 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 SOD3P08294 240 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 CD14P08571 375 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 CECR9P0C854 216 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 OR8G3PP0DMU2 310 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 ZNF26P17031 533 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-208ENST00000520228 GUCA1AP43080 201 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-208ENST00000520228 MAGEA2P43356 314 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 IDH3GP51553 393 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-208ENST00000520228 MYBPC1Q00872 1141 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 CD47Q08722 323 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 ZNF415Q09FC8 603 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 NPRL3Q12980 569 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 FLOT2Q14254 428 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 GSG1Q2KHT4 349 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 THEM4Q5T1C6 240 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 OR2T5Q6IEZ7 315 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 SMARCD3Q6STE5 483 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 SPNS3Q6ZMD2 512 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 DPY19L2P2Q6ZN68 376 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 DPPA2Q7Z7J5 298 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 SPATA24Q86W54 205 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 SKA3Q8IX90 412 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 AQP12AQ8IXF9 295 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 SLC22A24Q8N4F4 322 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 LINC00471Q8N535 108 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 ZNF383Q8NA42 475 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 OR11H4Q8NGC9 324 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 OR2T29Q8NH02 315 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 ZNF519Q8TB69 540 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 FNDC8Q8TC99 324 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 GNPDA2Q8TDQ7 276 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 TMEM190Q8WZ59 177 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 NSMAFQ92636 917 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 GPA33Q99795 319 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 SH3GL3Q99963 347 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 DHRS9Q9BPW9 319 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 ALG12Q9BV10 488 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 CHID1Q9BWS9 393 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 CXXC4Q9H2H0 198 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 FAIMQ9NVQ4 179 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 TMEM38BQ9NVV0 291 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 B3GNT2Q9NY97 397 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 IL20RAQ9UHF4 553 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 RNF150Q9ULK6 438 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 MOKQ9UQ07 419 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 DHRS12A0PJE2 317 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 MGRN1O60291 552 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 CCNB2O95067 398 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 UBL3O95164 117 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 SLC2A10O95528 541 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 RAB36O95755 333 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 IGKV3-15P01624 115 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 NPR2P20594 1047 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 GSSP48637 474 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 FABP6P51161 128 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 ZNF133P52736 654 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-208ENST00000520228 NAAAQ02083 359 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 FMODQ06828 376 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 TSPAN31Q12999 210 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 RBM39Q14498 530 aaKnown RBP5.79□□□□□ -1.48
SDCBP-208ENST00000520228 SGCAQ16586 387 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 PGGHGQ32M88 737 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 RFX4Q33E94 735 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 SLC36A2Q495M3 483 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 KRBOX4Q5JUW0 171 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 C10orf128Q5T292 105 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 AGAP6Q5VW22 663 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 ZNF544Q6NX49 715 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 C1orf94Q6P1W5 598 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 SLC25A47Q6Q0C1 308 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 B3GLCTQ6Y288 498 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 ZBTB49Q6ZSB9 765 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 SLC16A14Q7RTX9 510 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 LRRC75A-AS1Q8N1F1 130 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 CLDN22Q8N7P3 220 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 OR4F15Q8NGB8 312 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 OR4C15Q8NGM1 316 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 FANK1Q8TC84 345 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 CANT1Q8WVQ1 401 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 MOB3AQ96BX8 217 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 Q96M85 177 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 GPX7Q96SL4 187 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-208ENST00000520228 REEP1Q9H902 201 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 RNF121Q9H920 327 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 SIAEQ9HAT2 523 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 SLC7A8Q9UHI5 535 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 GAB2Q9UQC2 676 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 POMPQ9Y244 141 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 SAMHD1Q9Y3Z3 626 aaKnown RBP5.79□□□□□ -1.48
SDCBP-208ENST00000520228 UGT2A1Q9Y4X1 527 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 IER3IP1Q9Y5U9 82 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 U3KQV3 271 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 ROS1P08922 2347 aa5.79□□□□□ -1.48
SDCBP-208ENST00000520228 IGKV1D-43A0A0B4J1Z2 117 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 IGHV2OR16-5A0A0B4J2B6 119 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms