RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 ZC3HAV1LQ96H79 300 aaKnown RBP10.43□□□□□ -0.74
SYNPO-204ENST00000519664 GPR137Q96N19 417 aa10.43□□□□□ -0.74
SYNPO-204ENST00000519664 ZNF275Q9NSD4 429 aaPredicted RBP10.43□□□□□ -0.74
SYNPO-204ENST00000519664 OCIAD1Q9NX40 245 aa10.43□□□□□ -0.74
SYNPO-204ENST00000519664 RLFQ13129 1914 aa10.43□□□□□ -0.74
SYNPO-204ENST00000519664 NYNRINQ9P2P1 1898 aaKnown RBP10.42□□□□□ -0.74
SYNPO-204ENST00000519664 PATE3B3GLJ2 98 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 SIRPB1O00241 398 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 ZNHIT1O43257 154 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 GPR137BO60478 399 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 TBX6O95947 436 aaPredicted RBP10.42□□□□□ -0.74
SYNPO-204ENST00000519664 ATPAF1Q5TC12 328 aaPredicted RBP10.42□□□□□ -0.74
SYNPO-204ENST00000519664 Q6ZRG5 221 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 ZNF808Q8N4W9 903 aaPredicted RBP10.42□□□□□ -0.74
SYNPO-204ENST00000519664 DMBX1Q8NFW5 382 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 OR6K3Q8NGY3 331 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 OR2G3Q8NGZ4 309 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 NXF2Q9GZY0 626 aaKnown RBP10.42□□□□□ -0.74
SYNPO-204ENST00000519664 OPA3Q9H6K4 179 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 MOB1AQ9H8S9 216 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 PLEKHA3Q9HB20 300 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 NTMQ9P121 344 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 CLEC1BQ9P126 229 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 PPP1R3CQ9UQK1 317 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 TCRBV16S1A1N1A0A5B0 115 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 ANKRD20A5PA0PJZ0 165 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 KLRC4-KLRK1H3BQV0 150 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 DEGS1O15121 323 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 PNLIPP16233 465 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 INSM1Q01101 510 aaPredicted RBP10.42□□□□□ -0.74
SYNPO-204ENST00000519664 SLC30A7Q8NEW0 376 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 OR13C8Q8NGS7 320 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 PPP1R35Q8TAP8 253 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 MFRPQ9BY79 579 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 MRPS18AQ9NVS2 196 aaKnown RBP10.42□□□□□ -0.74
SYNPO-204ENST00000519664 ICAM5Q9UMF0 924 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 A0A1W2PPV4 95 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 SERPINA7P05543 415 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 TMEM128Q5BJH2 165 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 BVESQ8NE79 360 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 CADM4Q8NFZ8 388 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 KIRREL1Q96J84 757 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 ZNF75AQ96N20 296 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 ESRP2Q9H6T0 727 aaKnown RBP10.42□□□□□ -0.74
SYNPO-204ENST00000519664 ST6GALNAC2Q9UJ37 374 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 RNF150Q9ULK6 438 aa10.42□□□□□ -0.74
SYNPO-204ENST00000519664 IL11P20809 199 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 CHATP28329 748 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 FABP6P51161 128 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 ELLP55199 621 aaPredicted RBP10.41□□□□□ -0.74
SYNPO-204ENST00000519664 HAGHQ16775 308 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 TMEM229BQ8NBD8 167 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 SMRP1Q8NCR6 262 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 DEFB108BQ8NET1 73 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 TM4SF19Q96DZ7 209 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 FOXB1Q99853 325 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 AICDAQ9GZX7 198 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 NELFAQ9H3P2 528 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 CENPFP49454 3210 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 CST7O76096 145 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 IL5P05113 134 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 RAG2P55895 527 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 MGAT2Q10469 447 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 RASL10BQ96S79 203 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 MS4A7Q9GZW8 240 aaPredicted RBP10.41□□□□□ -0.74
SYNPO-204ENST00000519664 TOLLIPQ9H0E2 274 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 SOCS1O15524 211 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 ZIC2O95409 532 aaPredicted RBP10.41□□□□□ -0.74
SYNPO-204ENST00000519664 HLA-HP01893 362 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 BATFQ16520 125 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 LGALSLQ3ZCW2 172 aaPredicted RBP10.41□□□□□ -0.74
SYNPO-204ENST00000519664 C11orf87Q6NUJ2 197 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 CRIPAKQ8N1N5 446 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 ASB5Q8WWX0 329 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 FER1L6-AS2Q96M78 137 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 PLK3Q9H4B4 646 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 MIOXQ9UGB7 285 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 RGPD4Q7Z3J3 1758 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 HSPB2A8KAH6 182 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 SSSCA1O60232 199 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 IGHEP01854 428 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 THY1P04216 161 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 ZNF32P17041 273 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 PTGFRP43088 359 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 AGFG1P52594 562 aaKnown RBP10.41□□□□□ -0.74
SYNPO-204ENST00000519664 HSPB2Q16082 182 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 RHBDD2Q6NTF9 364 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 DHRS13Q6UX07 377 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 CLEC9AQ6UXN8 241 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 TFAP2EQ6VUC0 442 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 OR10J5Q8NHC4 309 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 UCN2Q96RP3 112 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 TMPRSS5Q9H3S3 457 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 LHX6Q9UPM6 363 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 SF3B6Q9Y3B4 125 aaKnown RBP10.41□□□□□ -0.74
SYNPO-204ENST00000519664 KPTNQ9Y664 436 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 RGPD3A6NKT7 1758 aaPredicted RBP10.41□□□□□ -0.74
SYNPO-204ENST00000519664 SHANK1Q9Y566 2161 aa10.41□□□□□ -0.74
SYNPO-204ENST00000519664 FREM3P0C091 2139 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 KCNAB3O43448 404 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms