RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 SELENOTP62341 195 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 MAJINQ3KP22 176 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 POM121L1PQ3SYA9 428 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 LEMD1Q68G75 181 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 RTN4RL1Q86UN2 441 aaPredicted RBP11.98□□□□□ -0.49
PABPC1-208ENST00000519004 LRP11Q86VZ4 500 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 OR4N5Q8IXE1 308 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 NKAIN3Q8N8D7 197 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 LRRC75AQ8NAA5 344 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 OTOSQ8NHW6 89 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 EXTL1Q92935 676 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 MRPL24Q96A35 216 aaKnown RBP11.98□□□□□ -0.49
PABPC1-208ENST00000519004 APOBEC3BQ9UH17 382 aaKnown RBP11.98□□□□□ -0.49
PABPC1-208ENST00000519004 CHTOPQ9Y3Y2 248 aaKnown RBP11.98□□□□□ -0.49
PABPC1-208ENST00000519004 ARID1AO14497 2285 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 DDNO94850 711 aaPredicted RBP11.98□□□□□ -0.49
PABPC1-208ENST00000519004 VSIG8P0DPA2 414 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 OR10J1P30954 320 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 ALDH3B1P43353 468 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 DNASE1L1P49184 302 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 RAB7AP51149 207 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 BATFQ16520 125 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 RIPPLY2Q5TAB7 128 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 FHL5Q5TD97 284 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 C1orf189Q5VU69 101 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 ZNF100Q8IYN0 542 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 GBGT1Q8N5D6 347 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 ADPRHL1Q8NDY3 354 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 OR5L2Q8NGL0 311 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 IGSF21Q96ID5 467 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 ALKBH3Q96Q83 286 aaPredicted RBP11.98□□□□□ -0.49
PABPC1-208ENST00000519004 MIEN1Q9BRT3 115 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 FOXJ2Q9P0K8 574 aa11.98□□□□□ -0.49
PABPC1-208ENST00000519004 MRPS23Q9Y3D9 190 aaKnown RBP11.98□□□□□ -0.49
PABPC1-208ENST00000519004 CDC14CA4D256 554 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 NKX6-3A6NJ46 265 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 LMX1BO60663 402 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 CSF2RAP15509 400 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 SGCGQ13326 291 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 ITPRIPL2Q3MIP1 535 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 FAM90A2PQ658T7 463 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 ARMC6Q6NXE6 501 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 ZFP62Q8NB50 900 aaPredicted RBP11.97□□□□□ -0.49
PABPC1-208ENST00000519004 CLDND2Q8NHS1 167 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 B9D1Q9UPM9 204 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 FANCMQ8IYD8 2048 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 K7EP13 123 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 K7EQS6 105 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 CCL25O15444 150 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 XRCC2O43543 280 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 CBR3O75828 277 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 UMODP07911 640 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 RBMXP38159 391 aaKnown RBP11.97□□□□□ -0.49
PABPC1-208ENST00000519004 PRDX1Q06830 199 aaKnown RBP11.97□□□□□ -0.49
PABPC1-208ENST00000519004 TAF9Q16594 264 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 GPR157Q5UAW9 335 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 CATSPERDQ86XM0 798 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 MAML2Q8IZL2 1156 aaPredicted RBP11.97□□□□□ -0.49
PABPC1-208ENST00000519004 OR2AJ1Q8NGZ0 328 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 SCARF2Q96GP6 870 aaPredicted RBP11.97□□□□□ -0.49
PABPC1-208ENST00000519004 PYGO2Q9BRQ0 406 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 NICN1Q9BSH3 213 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 AURKAIP1Q9NWT8 199 aaPredicted RBP11.97□□□□□ -0.49
PABPC1-208ENST00000519004 SLC25A13Q9UJS0 675 aa11.97□□□□□ -0.49
PABPC1-208ENST00000519004 C19orf53Q9UNZ5 99 aaPredicted RBP11.97□□□□□ -0.49
PABPC1-208ENST00000519004 SOX1O00570 391 aaPredicted RBP11.96□□□□□ -0.49
PABPC1-208ENST00000519004 AHSA1O95433 338 aa11.96□□□□□ -0.49
PABPC1-208ENST00000519004 KLF8O95600 359 aaPredicted RBP11.96□□□□□ -0.49
PABPC1-208ENST00000519004 CD55P08174 381 aa11.96□□□□□ -0.49
PABPC1-208ENST00000519004 BCKDHBP21953 392 aa11.96□□□□□ -0.49
PABPC1-208ENST00000519004 CTXN1P60606 82 aa11.96□□□□□ -0.49
PABPC1-208ENST00000519004 PNRC1Q12796 327 aaPredicted RBP11.96□□□□□ -0.49
PABPC1-208ENST00000519004 COL5A1-AS1Q5SY13 56 aa11.96□□□□□ -0.49
PABPC1-208ENST00000519004 ZNF66Q6ZN08 573 aa11.96□□□□□ -0.49
PABPC1-208ENST00000519004 CMTM8Q8IZV2 173 aa11.96□□□□□ -0.49
PABPC1-208ENST00000519004 C17orf78Q8N4C9 275 aa11.96□□□□□ -0.49
PABPC1-208ENST00000519004 OR5H2Q8NGV7 314 aa11.96□□□□□ -0.49
PABPC1-208ENST00000519004 OR2G3Q8NGZ4 309 aa11.96□□□□□ -0.49
PABPC1-208ENST00000519004 TMEM170AQ8WVE7 144 aa11.96□□□□□ -0.49
PABPC1-208ENST00000519004 HAS2Q92819 552 aa11.96□□□□□ -0.49
PABPC1-208ENST00000519004 WFIKKN1Q96NZ8 548 aa11.96□□□□□ -0.49
PABPC1-208ENST00000519004 C20orf144Q9BQM9 153 aa11.96□□□□□ -0.49
PABPC1-208ENST00000519004 ZNF700Q9H0M5 742 aa11.96□□□□□ -0.49
PABPC1-208ENST00000519004 P4HTMQ9NXG6 502 aa11.96□□□□□ -0.49
PABPC1-208ENST00000519004 HCSTQ9UBK5 93 aa11.96□□□□□ -0.49
PABPC1-208ENST00000519004 AK3Q9UIJ7 227 aa11.96□□□□□ -0.49
PABPC1-208ENST00000519004 B3GALT5Q9Y2C3 310 aa11.96□□□□□ -0.49
PABPC1-208ENST00000519004 CACNA1CQ13936 2221 aa11.96□□□□□ -0.5
PABPC1-208ENST00000519004 A0A0A6YYD4 124 aa11.96□□□□□ -0.5
PABPC1-208ENST00000519004 PRSS47A8MTI9 375 aa11.96□□□□□ -0.5
PABPC1-208ENST00000519004 TSPAN2O60636 221 aa11.96□□□□□ -0.5
PABPC1-208ENST00000519004 KNG1P01042 644 aa11.96□□□□□ -0.5
PABPC1-208ENST00000519004 GSTP1P09211 210 aaKnown RBP11.96□□□□□ -0.5
PABPC1-208ENST00000519004 CHRNB4P30926 498 aa11.96□□□□□ -0.5
PABPC1-208ENST00000519004 CTHP32929 405 aa11.96□□□□□ -0.5
PABPC1-208ENST00000519004 WNT5AP41221 380 aa11.96□□□□□ -0.5
PABPC1-208ENST00000519004 SQSTM1Q13501 440 aa11.96□□□□□ -0.5
PABPC1-208ENST00000519004 ASTLQ6HA08 431 aaPredicted RBP11.96□□□□□ -0.5
PABPC1-208ENST00000519004 SPRED2Q7Z698 418 aa11.96□□□□□ -0.5
PABPC1-208ENST00000519004 NRSN1Q8IZ57 195 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms