RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 TMEM175Q9BSA9 504 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 MARVELD1Q9BSK0 173 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 ARMC7Q9H6L4 198 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 TAS2R5Q9NYW4 299 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 NDRG2Q9UN36 371 aaKnown RBP2.28□□□□□ -2.04
SQLE-202ENST00000518604 ZNF608Q9ULD9 1512 aaPredicted RBP2.27□□□□□ -2.05
SQLE-202ENST00000518604 NPHP4O75161 1426 aaPredicted RBP2.27□□□□□ -2.05
SQLE-202ENST00000518604 A0A1W2PRF3 423 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 A0A1W2PRM7 423 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 GOLGA6L4A6NEF3 574 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 CENPXA8MT69 81 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 KLK1P06870 262 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 PRKACAP17612 351 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 GABRR2P28476 465 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 CSKP41240 450 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 GALR1P47211 349 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 PSMD4P55036 377 aaKnown RBP2.27□□□□□ -2.05
SQLE-202ENST00000518604 MTPNP58546 118 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 SLC35A1P78382 337 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 ELF3P78545 371 aaPredicted RBP2.27□□□□□ -2.05
SQLE-202ENST00000518604 LCN2P80188 198 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 DOC2AQ14183 400 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 MAPRE2Q15555 327 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 TSC22D1Q15714 1073 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 MLIPQ5VWP3 458 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 KDM4DQ6B0I6 523 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 MORN3Q6PF18 240 aaPredicted RBP2.27□□□□□ -2.05
SQLE-202ENST00000518604 NT5DC3Q86UY8 548 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 OR5T3Q8NGG3 340 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 OR6K6Q8NGW6 343 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 OR1P1Q8NH06 330 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 S100PBPQ96BU1 408 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 PDCD1LG2Q9BQ51 273 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 OR51B5Q9H339 312 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 CRLF2Q9HC73 371 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 DHCR7Q9UBM7 475 aaKnown RBP2.27□□□□□ -2.05
SQLE-202ENST00000518604 HMGXB4Q9UGU5 601 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 SIGLEC1Q9BZZ2 1709 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 NEURL4Q96JN8 1562 aa2.27□□□□□ -2.05
SQLE-202ENST00000518604 OR6C70A6NIJ9 312 aa2.26□□□□□ -2.05
SQLE-202ENST00000518604 IGLV7-43P04211 117 aa2.26□□□□□ -2.05
SQLE-202ENST00000518604 IL3RAP26951 378 aa2.26□□□□□ -2.05
SQLE-202ENST00000518604 RPS11P62280 158 aaKnown RBP eCLIP2.26□□□□□ -2.05
SQLE-202ENST00000518604 RBX1P62877 108 aa2.26□□□□□ -2.05
SQLE-202ENST00000518604 LINC00523Q86TU6 105 aa2.26□□□□□ -2.05
SQLE-202ENST00000518604 LINC00304Q8N9R0 145 aa2.26□□□□□ -2.05
SQLE-202ENST00000518604 ZNF680Q8NEM1 530 aa2.26□□□□□ -2.05
SQLE-202ENST00000518604 C1orf64Q8NEQ6 169 aa2.26□□□□□ -2.05
SQLE-202ENST00000518604 TMEM159Q96B96 161 aa2.26□□□□□ -2.05
SQLE-202ENST00000518604 STMN4Q9H169 189 aaPredicted RBP2.26□□□□□ -2.05
SQLE-202ENST00000518604 ARV1Q9H2C2 271 aa2.26□□□□□ -2.05
SQLE-202ENST00000518604 LINC00574Q9H8X3 128 aa2.26□□□□□ -2.05
SQLE-202ENST00000518604 ARPC4-TTLL3A0A0A6YYG9 625 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 IGHV6-1A0A0B4J1U7 121 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 IGHV2OR16-5A0A0B4J2B6 119 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 ZNF233A6NK53 670 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 DFFAO00273 331 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 SMC2O95347 1197 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 SRMP19623 302 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 PSMC5P62195 406 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 ST3GAL4Q11206 333 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 IL15RAQ13261 267 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 SP6Q3SY56 376 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 HHATQ5VTY9 493 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 VTCN1Q7Z7D3 282 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 ZFAND1Q8TCF1 268 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 TMEM234Q8WY98 164 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 OR8D1Q8WZ84 308 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 Q96MT0 163 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 TBL1XR1Q9BZK7 514 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 LHX5Q9H2C1 402 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 TDRD3Q9H7E2 651 aaKnown RBP2.25□□□□□ -2.05
SQLE-202ENST00000518604 VAX2Q9UIW0 290 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 ANKRD12Q6UB98 2062 aa2.25□□□□□ -2.05
SQLE-202ENST00000518604 TRAV8-4A0A0B4J246 113 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 TRAV8-6A0A0B4J262 113 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 A0A0G2JMP0 313 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 A0A0X1KG70 313 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 TMEM72A0PK05 275 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 VGLL3A8MV65 326 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 GCGP01275 180 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 P01737 135 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 IGKV4-1P06312 121 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 CD28P10747 220 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 TUBG1P23258 451 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 IVDP26440 423 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 HLA-DMAP28067 261 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 CFHR2P36980 270 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 BCAP31P51572 246 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 PAFAH1B2P68402 229 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 FBXL19-AS1Q494R0 122 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 FAM104BQ5XKR9 115 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 THOC7Q6I9Y2 204 aaKnown RBP2.24□□□□□ -2.05
SQLE-202ENST00000518604 BBS7Q8IWZ6 715 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 API5Q9BZZ5 524 aaKnown RBP2.24□□□□□ -2.05
SQLE-202ENST00000518604 DHX35Q9H5Z1 703 aaKnown RBP2.24□□□□□ -2.05
SQLE-202ENST00000518604 KIR3DX1Q9H7L2 352 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 RPRD1BQ9NQG5 326 aaKnown RBP2.24□□□□□ -2.05
SQLE-202ENST00000518604 TUBG2Q9NRH3 451 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 RWDD2AQ9UIY3 292 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms