RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 IZUMO2Q6UXV1 221 aa18.43■□□□□ 0.54
VEGFA-217ENST00000518538 GLCCI1Q86VQ1 547 aa18.43■□□□□ 0.54
VEGFA-217ENST00000518538 RDH10Q8IZV5 341 aa18.43■□□□□ 0.54
VEGFA-217ENST00000518538 GCSAMQ8N6F7 178 aa18.43■□□□□ 0.54
VEGFA-217ENST00000518538 C10orf35Q96D05 121 aa18.43■□□□□ 0.54
VEGFA-217ENST00000518538 TMEM246Q9BRR3 403 aa18.43■□□□□ 0.54
VEGFA-217ENST00000518538 LPAR2Q9HBW0 351 aa18.43■□□□□ 0.54
VEGFA-217ENST00000518538 PSORS1C1Q9UIG5 152 aa18.43■□□□□ 0.54
VEGFA-217ENST00000518538 TLN2Q9Y4G6 2542 aa18.43■□□□□ 0.54
VEGFA-217ENST00000518538 ABCA2Q9BZC7 2435 aa18.42■□□□□ 0.54
VEGFA-217ENST00000518538 OR4C45A6NMZ5 311 aa18.42■□□□□ 0.54
VEGFA-217ENST00000518538 ZNF732B4DXR9 585 aa18.42■□□□□ 0.54
VEGFA-217ENST00000518538 F5H0A9 414 aaPredicted RBP18.42■□□□□ 0.54
VEGFA-217ENST00000518538 H3BSH0 61 aa18.42■□□□□ 0.54
VEGFA-217ENST00000518538 LGALS8O00214 317 aa18.42■□□□□ 0.54
VEGFA-217ENST00000518538 CDIPTO14735 213 aa18.42■□□□□ 0.54
VEGFA-217ENST00000518538 XPNPEP2O43895 674 aa18.42■□□□□ 0.54
VEGFA-217ENST00000518538 TGM4P49221 684 aa18.42■□□□□ 0.54
VEGFA-217ENST00000518538 RIPPLY3P57055 190 aa18.42■□□□□ 0.54
VEGFA-217ENST00000518538 HOXA4Q00056 320 aaPredicted RBP18.42■□□□□ 0.54
VEGFA-217ENST00000518538 ST3GAL4Q11206 333 aa18.42■□□□□ 0.54
VEGFA-217ENST00000518538 TMPRSS11AQ6ZMR5 421 aa18.42■□□□□ 0.54
VEGFA-217ENST00000518538 BOLLQ8N9W6 283 aaKnown RBP18.42■□□□□ 0.54
VEGFA-217ENST00000518538 SCCPDHQ8NBX0 429 aa18.42■□□□□ 0.54
VEGFA-217ENST00000518538 LRRC29Q8WV35 223 aa18.42■□□□□ 0.54
VEGFA-217ENST00000518538 RPL3LQ92901 407 aaKnown RBP18.42■□□□□ 0.54
VEGFA-217ENST00000518538 GPR173Q9NS66 373 aa18.42■□□□□ 0.54
VEGFA-217ENST00000518538 ANKRD61A6NGH8 418 aa18.41■□□□□ 0.54
VEGFA-217ENST00000518538 A6NIN4 97 aa18.41■□□□□ 0.54
VEGFA-217ENST00000518538 E9PI62 339 aa18.41■□□□□ 0.54
VEGFA-217ENST00000518538 CCDC159P0C7I6 412 aa18.41■□□□□ 0.54
VEGFA-217ENST00000518538 CD80P33681 288 aa18.41■□□□□ 0.54
VEGFA-217ENST00000518538 KCNJ8Q15842 424 aa18.41■□□□□ 0.54
VEGFA-217ENST00000518538 DMRTC1Q5HYR2 192 aa18.41■□□□□ 0.54
VEGFA-217ENST00000518538 DCDC5Q6ZRR9 648 aa18.41■□□□□ 0.54
VEGFA-217ENST00000518538 C19orf18Q8NEA5 215 aa18.41■□□□□ 0.54
VEGFA-217ENST00000518538 BPIFB6Q8NFQ5 453 aa18.41■□□□□ 0.54
VEGFA-217ENST00000518538 TMEM186Q96B77 213 aa18.41■□□□□ 0.54
VEGFA-217ENST00000518538 ANKRD60Q9BZ19 345 aa18.41■□□□□ 0.54
VEGFA-217ENST00000518538 OR51I2Q9H344 312 aa18.41■□□□□ 0.54
VEGFA-217ENST00000518538 METTL17Q9H7H0 456 aaPredicted RBP18.41■□□□□ 0.54
VEGFA-217ENST00000518538 TRIM36Q9NQ86 728 aa18.41■□□□□ 0.54
VEGFA-217ENST00000518538 CHCHD3Q9NX63 227 aaKnown RBP18.41■□□□□ 0.54
VEGFA-217ENST00000518538 MIOXQ9UGB7 285 aa18.41■□□□□ 0.54
VEGFA-217ENST00000518538 HHLA2Q9UM44 414 aa18.41■□□□□ 0.54
VEGFA-217ENST00000518538 TRAV38-1A0A0B4J264 116 aa18.4■□□□□ 0.54
VEGFA-217ENST00000518538 TRAV20A0A0B4J274 112 aa18.4■□□□□ 0.54
VEGFA-217ENST00000518538 OOEPA6NGQ2 149 aa18.4■□□□□ 0.54
VEGFA-217ENST00000518538 PLPP2O43688 288 aa18.4■□□□□ 0.54
VEGFA-217ENST00000518538 CRLF1O75462 422 aa18.4■□□□□ 0.54
VEGFA-217ENST00000518538 RPSAP08865 295 aaKnown RBP18.4■□□□□ 0.54
VEGFA-217ENST00000518538 WNT2P09544 360 aa18.4■□□□□ 0.54
VEGFA-217ENST00000518538 EGR1P18146 543 aa18.4■□□□□ 0.54
VEGFA-217ENST00000518538 OR2G6Q5TZ20 316 aa18.4■□□□□ 0.54
VEGFA-217ENST00000518538 SFRP4Q6FHJ7 346 aaPredicted RBP18.4■□□□□ 0.54
VEGFA-217ENST00000518538 AHSA2Q719I0 299 aa18.4■□□□□ 0.54
VEGFA-217ENST00000518538 ZNF676Q8N7Q3 588 aa18.4■□□□□ 0.54
VEGFA-217ENST00000518538 DEFB108BQ8NET1 73 aa18.4■□□□□ 0.54
VEGFA-217ENST00000518538 OR10Z1Q8NGY1 313 aa18.4■□□□□ 0.54
VEGFA-217ENST00000518538 CHST5Q9GZS9 411 aa18.4■□□□□ 0.54
VEGFA-217ENST00000518538 FKBP14Q9NWM8 211 aa18.4■□□□□ 0.54
VEGFA-217ENST00000518538 HIF1ANQ9NWT6 349 aa18.4■□□□□ 0.54
VEGFA-217ENST00000518538 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.4■□□□□ 0.548e-9■■■□□ 15.2
VEGFA-217ENST00000518538 FN1P02751 2386 aaKnown RBP18.39■□□□□ 0.53
VEGFA-217ENST00000518538 TMEM212A6NML5 194 aa18.39■□□□□ 0.53
VEGFA-217ENST00000518538 C3orf80F5H4A9 247 aa18.39■□□□□ 0.53
VEGFA-217ENST00000518538 FOXH1O75593 365 aa18.39■□□□□ 0.53
VEGFA-217ENST00000518538 RPS2P15880 293 aaKnown RBP18.39■□□□□ 0.53
VEGFA-217ENST00000518538 HOXB4P17483 251 aaPredicted RBP18.39■□□□□ 0.53
VEGFA-217ENST00000518538 PCMT1P22061 227 aa18.39■□□□□ 0.53
VEGFA-217ENST00000518538 MYF6P23409 242 aa18.39■□□□□ 0.53
VEGFA-217ENST00000518538 CCDC58Q4VC31 144 aa18.39■□□□□ 0.53
VEGFA-217ENST00000518538 C6orf141Q5SZD1 244 aa18.39■□□□□ 0.53
VEGFA-217ENST00000518538 TEX36Q5VZQ5 186 aa18.39■□□□□ 0.53
VEGFA-217ENST00000518538 OR52N1Q8NH53 320 aa18.39■□□□□ 0.53
VEGFA-217ENST00000518538 TECTBQ96PL2 329 aa18.39■□□□□ 0.53
VEGFA-217ENST00000518538 CLEC2DQ9UHP7 191 aa18.39■□□□□ 0.53
VEGFA-217ENST00000518538 LRCH1Q9Y2L9 728 aa18.39■□□□□ 0.53
VEGFA-217ENST00000518538 RRP15Q9Y3B9 282 aaKnown RBP18.39■□□□□ 0.53
VEGFA-217ENST00000518538 MALRD1Q5VYJ5 2156 aa18.39■□□□□ 0.53
VEGFA-217ENST00000518538 NSD1Q96L73 2696 aaPredicted RBP18.39■□□□□ 0.53
VEGFA-217ENST00000518538 PQLC2LA1A4F0 135 aa18.38■□□□□ 0.53
VEGFA-217ENST00000518538 A8MXK9 166 aa18.38■□□□□ 0.53
VEGFA-217ENST00000518538 SRRM5B3KS81 715 aa18.38■□□□□ 0.53
VEGFA-217ENST00000518538 GATBO75879 557 aaKnown RBP18.38■□□□□ 0.53
VEGFA-217ENST00000518538 ZFPL1O95159 310 aa18.38■□□□□ 0.53
VEGFA-217ENST00000518538 GTF2A1P52655 376 aaPredicted RBP18.38■□□□□ 0.53
VEGFA-217ENST00000518538 SEC61A1P61619 476 aaKnown RBP18.38■□□□□ 0.53
VEGFA-217ENST00000518538 ESCO2Q56NI9 601 aa18.38■□□□□ 0.53
VEGFA-217ENST00000518538 NLRC3Q7RTR2 1065 aa18.38■□□□□ 0.53
VEGFA-217ENST00000518538 ZNF573Q86YE8 665 aa18.38■□□□□ 0.53
VEGFA-217ENST00000518538 STX19Q8N4C7 294 aa18.38■□□□□ 0.53
VEGFA-217ENST00000518538 OR8B3Q8NGG8 313 aa18.38■□□□□ 0.53
VEGFA-217ENST00000518538 OR10AC1Q8NH08 325 aa18.38■□□□□ 0.53
VEGFA-217ENST00000518538 OR5AK2Q8NH90 309 aa18.38■□□□□ 0.53
VEGFA-217ENST00000518538 PP6455Q8WZ26 134 aa18.38■□□□□ 0.53
VEGFA-217ENST00000518538 ADAT3Q96EY9 351 aaPredicted RBP18.38■□□□□ 0.53
VEGFA-217ENST00000518538 NEIL1Q96FI4 390 aaPredicted RBP18.38■□□□□ 0.53
VEGFA-217ENST00000518538 OR8B2Q96RD0 313 aa18.38■□□□□ 0.53
VEGFA-217ENST00000518538 COMMD4Q9H0A8 199 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms