RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 FNDC1Q4ZHG4 1894 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 A0A0G2JNJ9 132 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 A0A1W2PRS3 328 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 GAGE12BA1L429 117 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 SMIM30A4D0T7 59 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 HCRTR1O43613 425 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 FGF17O60258 216 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 LRP3O75074 770 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 LRATO95237 230 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 GPANK1O95872 356 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 SLC16A8O95907 504 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 POU2F2P09086 479 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR4A8P0C604 315 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR4Q2P0C623 313 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 DANCRP0C864 163 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZNF286BP0CG31 522 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR12D1P0DN82 309 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 ALPPL2P10696 532 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 CD99P14209 185 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 HOXB9P17482 250 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 GZMHP20718 246 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 DCTDP32321 178 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 PRSS3P35030 304 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 SSTR5P35346 364 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 AQP2P41181 271 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 WASP42768 502 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 LGALS7P47929 136 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 PTH2RP49190 550 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 MEOX1P50221 254 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 P2RX1P51575 399 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 LBX1P52954 281 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 FOXL2P58012 376 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 IL2P60568 153 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 S100A10P60903 97 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 LCN6P62502 163 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 RPL38P63173 70 aaKnown RBP4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 CSNK2A1P68400 391 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 ADAM8P78325 824 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 HLA-DRB3P79483 266 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 ROM1Q03395 351 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 CACNG1Q06432 222 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 FZD2Q14332 565 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 PCOLCEQ15113 449 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 RGNQ15493 299 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 EXT1Q16394 746 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 TMEM249Q2WGJ8 235 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZNF699Q32M78 642 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 LRRC73Q5JTD7 316 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 ENTPD8Q5MY95 495 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 LY6G6FQ5SQ64 297 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 GFI1BQ5VTD9 330 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 PLCXD3Q63HM9 321 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 CEACAM20Q6UY09 585 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZNF562Q6V9R5 426 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 MED25Q71SY5 747 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 ACOT1Q86TX2 421 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 RTN4RL1Q86UN2 441 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZNF429Q86V71 674 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 C17orf64Q86WR6 236 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 CMTM4Q8IZR5 234 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 IQCF1Q8N6M8 205 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 CSNK2A3Q8NEV1 391 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 TSTD1Q8NFU3 115 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR10H4Q8NGA5 316 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR6T1Q8NGN1 323 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR13C9Q8NGT0 318 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 SPRYD4Q8WW59 207 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 SPSB4Q96A44 273 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 GPR146Q96CH1 333 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 SNX22Q96L94 193 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 FER1L6-AS2Q96M78 137 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 SIGLEC12Q96PQ1 595 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 ALG12Q9BV10 488 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 CIPCQ9C0C6 399 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 IKZF5Q9H5V7 419 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 RAB18Q9NP72 206 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 NRIP3Q9NQ35 241 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 PXMP2Q9NR77 195 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 CYTL1Q9NRR1 136 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 FGF21Q9NSA1 209 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 SIRT3Q9NTG7 399 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 TMEM106BQ9NUM4 274 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 TMEM140Q9NV12 185 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 RLIMQ9NVW2 624 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 CLN8Q9UBY8 286 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 Q9UFV3 132 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 RNF150Q9ULK6 438 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 SIGLEC7Q9Y286 467 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 RHBDD3Q9Y3P4 386 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 CSAG2Q9Y5P2 127 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 CACNA1SQ13698 1873 aa4.26□□□□□ -1.73
HMGB1P19-201ENST00000517578 MYO18AQ92614 2054 aaKnown RBP4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 IGLV3-22A0A075B6J6 115 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 A0A0G2JK05 382 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 A0A1W2PS29 197 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 DAPL1A0PJW8 107 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 TMEM150BA6NC51 233 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 RBFOX3A6NFN3 312 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 C17orf105B2RV13 164 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 SOCS6O14544 535 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms