RNA–Protein interactions for RNA: ENST00000515514.1

CDK18-223, Transcript of cyclin dependent kinase 18, human

TSL 4

Gene CDK18, Length 541 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-223	ENST00000515514	KCTD8	Q6ZWB6	473 aa		10.14	□□□□□ -0.79
CDK18-223	ENST00000515514	KRT77	Q7Z794	578 aa		10.14	□□□□□ -0.79
CDK18-223	ENST00000515514	HS3ST5	Q8IZT8	346 aa		10.14	□□□□□ -0.79
CDK18-223	ENST00000515514	PIP4P2	Q8N4L2	257 aa		10.14	□□□□□ -0.79
CDK18-223	ENST00000515514	BBS1	Q8NFJ9	593 aa		10.14	□□□□□ -0.79
CDK18-223	ENST00000515514	ANGPTL6	Q8NI99	470 aa		10.14	□□□□□ -0.79
CDK18-223	ENST00000515514	FAM81A	Q8TBF8	368 aa		10.14	□□□□□ -0.79
CDK18-223	ENST00000515514	RPL3L	Q92901	407 aa	Known RBP	10.14	□□□□□ -0.79
CDK18-223	ENST00000515514	MED30	Q96HR3	178 aa		10.14	□□□□□ -0.79
CDK18-223	ENST00000515514	RNF170	Q96K19	258 aa		10.14	□□□□□ -0.79
CDK18-223	ENST00000515514	GAFA1	Q96PS6	74 aa		10.14	□□□□□ -0.79
CDK18-223	ENST00000515514	CITED1	Q99966	193 aa		10.14	□□□□□ -0.79
CDK18-223	ENST00000515514	YIPF3	Q9GZM5	350 aa		10.14	□□□□□ -0.79
CDK18-223	ENST00000515514	WDR13	Q9H1Z4	485 aa		10.14	□□□□□ -0.79
CDK18-223	ENST00000515514	FAM206A	Q9NX38	181 aa		10.14	□□□□□ -0.79
CDK18-223	ENST00000515514	ZNRD1	Q9P1U0	126 aa		10.14	□□□□□ -0.79
CDK18-223	ENST00000515514	DNAJB9	Q9UBS3	223 aa		10.14	□□□□□ -0.79
CDK18-223	ENST00000515514	FAM96B	Q9Y3D0	163 aa		10.14	□□□□□ -0.79
CDK18-223	ENST00000515514	BTBD17	A6NE02	478 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	OR5B21	A6NL26	309 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514		M0R1W7	72 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	EEF1B2	P24534	225 aa	Known RBP	10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	MAP2K3	P46734	347 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	GNG3	P63215	75 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	CBX1	P83916	185 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	ROM1	Q03395	351 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	APOF	Q13790	326 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	ZNF829	Q3KNS6	432 aa	Predicted RBP	10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	ZBTB37	Q5TC79	503 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	NCR3LG1	Q68D85	454 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	KCTD18	Q6PI47	426 aa	Predicted RBP	10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	GDPGP1	Q6ZNW5	385 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	C1orf122	Q6ZSJ8	110 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	TRPM8	Q7Z2W7	1104 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	PDZD9	Q8IXQ8	264 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	H1FX	Q92522	213 aa	Known RBP	10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	PIGC	Q92535	297 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	HIST1H2AA	Q96QV6	131 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	PRRG3	Q9BZD7	231 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	SIRT7	Q9NRC8	400 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	NLK	Q9UBE8	527 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	SLC25A10	Q9UBX3	287 aa	Predicted RBP	10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	VPREB3	Q9UKI3	123 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	TMEM14A	Q9Y6G1	99 aa		10.13	□□□□□ -0.79
CDK18-223	ENST00000515514	TMEM269	A0A1B0GVZ9	245 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	TCRBV3S1	A0A5B6	114 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	CCDC182	A6NF36	153 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	OR2AT4	A6NND4	320 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	RNASEK-C17orf49	H0YIS7	233 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	NPFF	O15130	113 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	KCNAB3	O43448	404 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	AKR7A2	O43488	359 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	FKBP6	O75344	327 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	ZNF254	O75437	659 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	IGLV3-1	P01715	115 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	ACAA1	P09110	424 aa	Predicted RBP	10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	PRKACG	P22612	351 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	GPM6A	P51674	278 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	GMFB	P60983	142 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	DGUOK	Q16854	277 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	CEACAM21	Q3KPI0	293 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	SPATA24	Q86W54	205 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	COMMD2	Q86X83	199 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514		Q8N7P7	452 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	OR5T2	Q8NGG2	359 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	ASB17	Q8WXJ9	295 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	NRBF2	Q96F24	287 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	MRO	Q9BYG7	248 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	METTL8	Q9H825	291 aa	Known RBP	10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	MOB1A	Q9H8S9	216 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	PAPOLB	Q9NRJ5	636 aa	Known RBP	10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	SNTG1	Q9NSN8	517 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	NUFIP1	Q9UHK0	495 aa	Known RBP	10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	ZNF222	Q9UK12	451 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	RNF114	Q9Y508	228 aa		10.12	□□□□□ -0.79
CDK18-223	ENST00000515514	IGKV1D-17	A0A075B6S4	117 aa		10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	TRBV23-1	A0A0A0MS06	115 aa		10.11	□□□□□ -0.79
CDK18-223	ENST00000515514		A0A1W2PQ09	198 aa		10.11	□□□□□ -0.79
CDK18-223	ENST00000515514		M0QZ24	198 aa		10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	TIMM23	O14925	209 aa		10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	GYG2	O15488	501 aa		10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	CLPX	O76031	633 aa		10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	PAH	P00439	452 aa		10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	GLRA1	P23415	457 aa		10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	SAA4	P35542	130 aa		10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	RIDA	P52758	137 aa	Known RBP	10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	PROK1	P58294	105 aa		10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	SRSF4	Q08170	494 aa	Known RBP	10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	ACSM1	Q08AH1	577 aa		10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	KLRD1	Q13241	179 aa		10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	SNAPC1	Q16533	368 aa		10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	TAF9	Q16594	264 aa		10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	TMEM236	Q5W0B7	351 aa		10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	DHRS7B	Q6IAN0	325 aa	Predicted RBP	10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	FAHD1	Q6P587	224 aa		10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	ZNF679	Q8IYX0	411 aa		10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	OR5A2	Q8NGI9	324 aa		10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	OR5R1	Q8NH85	324 aa		10.11	□□□□□ -0.79
CDK18-223	ENST00000515514	LINC01006	Q8NI28	216 aa		10.11	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms