RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ST8SIA4Q92187 359 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 TAF15Q92804 592 aaKnown RBP eCLIP9.54□□□□□ -0.88
VCAN-212ENST00000515397 DACT3Q96B18 629 aaPredicted RBP9.54□□□□□ -0.88
VCAN-212ENST00000515397 RNFT2Q96EX2 444 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 ZNF488Q96MN9 340 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 ZNF48Q96MX3 618 aaPredicted RBP9.54□□□□□ -0.88
VCAN-212ENST00000515397 PCGF1Q9BSM1 259 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 RNPEPL1Q9HAU8 725 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 AMBNQ9NP70 447 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 USE1Q9NZ43 259 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 DNAJB11Q9UBS4 358 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 NUP50Q9UKX7 468 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 MDFIC2A0A1B0GVS7 189 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 METTL15A6NJ78 407 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 PHYHO14832 338 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 INMTO95050 263 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 FSTL3O95633 263 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 IGLV3-1P01715 115 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 KRT8P05787 483 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 OR2T7P0C7T2 308 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 FPR2P25090 351 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 DCTDP32321 178 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 DLX1P56177 255 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 ARF6P62330 175 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 EGR3Q06889 387 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 MICBQ29980 383 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 ZNF684Q5T5D7 378 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 TEX36Q5VZQ5 186 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 RUSC1-AS1Q66K80 236 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 HAGHLQ6PII5 290 aaPredicted RBP9.53□□□□□ -0.88
VCAN-212ENST00000515397 BRD3OSQ6XYD6 125 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 ZBTB49Q6ZSB9 765 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 BTN2A1Q7KYR7 527 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 PDZD9Q8IXQ8 264 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 PQLC1Q8N2U9 271 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 FTMTQ8N4E7 242 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 ZDHHC22Q8N966 263 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 OR14K1Q8NGZ2 314 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 OR2T27Q8NH04 317 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 NPRL2Q8WTW4 380 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 RORBQ92753 470 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 HRASLS5Q96KN8 279 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 TLNRD1Q9H1K6 362 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 OR51I2Q9H344 312 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.53□□□□□ -0.88
VCAN-212ENST00000515397 ZNF391Q9UJN7 358 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 GNG8Q9UK08 70 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 GMPPBQ9Y5P6 360 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 SNX5Q9Y5X3 404 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 TENM1Q9UKZ4 2725 aa9.53□□□□□ -0.88
VCAN-212ENST00000515397 TRAV40A0A0B4J280 105 aa9.52□□□□□ -0.89
VCAN-212ENST00000515397 SRRM5B3KS81 715 aa9.52□□□□□ -0.89
VCAN-212ENST00000515397 E9PQ18 207 aa9.52□□□□□ -0.89
VCAN-212ENST00000515397 SYNGR1O43759 233 aa9.52□□□□□ -0.89
VCAN-212ENST00000515397 DHRS3O75911 302 aa9.52□□□□□ -0.89
VCAN-212ENST00000515397 NRASP01111 189 aa9.52□□□□□ -0.89
VCAN-212ENST00000515397 GABRA2P47869 451 aa9.52□□□□□ -0.89
VCAN-212ENST00000515397 MTNR1AP48039 350 aa9.52□□□□□ -0.89
VCAN-212ENST00000515397 HILS1P60008 231 aa9.52□□□□□ -0.89
VCAN-212ENST00000515397 KCNJ8Q15842 424 aa9.52□□□□□ -0.89
VCAN-212ENST00000515397 LRRC36Q1X8D7 754 aa9.52□□□□□ -0.89
VCAN-212ENST00000515397 CEACAM21Q3KPI0 293 aa9.52□□□□□ -0.89
VCAN-212ENST00000515397 FAM76BQ5HYJ3 339 aa9.52□□□□□ -0.89
VCAN-212ENST00000515397 CATSPERDQ86XM0 798 aa9.52□□□□□ -0.89
VCAN-212ENST00000515397 ANGPTL5Q86XS5 388 aa9.52□□□□□ -0.89
VCAN-212ENST00000515397 PRSS35Q8N3Z0 413 aa9.52□□□□□ -0.89
VCAN-212ENST00000515397 TRMT10AQ8TBZ6 339 aaKnown RBP9.52□□□□□ -0.89
VCAN-212ENST00000515397 RNF166Q96A37 237 aaPredicted RBP9.52□□□□□ -0.89
VCAN-212ENST00000515397 RAB3IPQ96QF0 476 aaPredicted RBP9.52□□□□□ -0.89
VCAN-212ENST00000515397 MNTQ99583 582 aa9.52□□□□□ -0.89
VCAN-212ENST00000515397 MS4A7Q9GZW8 240 aaPredicted RBP9.52□□□□□ -0.89
VCAN-212ENST00000515397 TNFRSF19Q9NS68 423 aa9.52□□□□□ -0.89
VCAN-212ENST00000515397 ACOXLQ9NUZ1 547 aa9.52□□□□□ -0.89
VCAN-212ENST00000515397 ENPP5Q9UJA9 477 aa9.52□□□□□ -0.89
VCAN-212ENST00000515397 TMEM210A6NLX4 147 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 NDUFA2O43678 99 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 GLRA1P23415 457 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 CFHR2P36980 270 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 KIR3DL2P43630 455 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 CEBPDP49716 269 aaPredicted RBP9.51□□□□□ -0.89
VCAN-212ENST00000515397 OR12D2P58182 307 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 SNRPGP62308 76 aaKnown RBP9.51□□□□□ -0.89
VCAN-212ENST00000515397 GNG3P63215 75 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 SCGB2A2Q13296 93 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 SNCBQ16143 134 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 CLVS2Q5SYC1 327 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 STUMQ69YW2 141 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 LHFPL3Q86UP9 236 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 ENTHD1Q8IYW4 607 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 TEX29Q8N6K0 151 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 OR5A2Q8NGI9 324 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 TRUB1Q8WWH5 349 aaKnown RBP9.51□□□□□ -0.89
VCAN-212ENST00000515397 AQP3Q92482 292 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 RFKQ969G6 155 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 UPRTQ96BW1 309 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 LGALS12Q96DT0 336 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 TBX15Q96SF7 602 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 C9orf16Q9BUW7 83 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 SUCNR1Q9BXA5 334 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 ELL3Q9HB65 397 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms