RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 PAX1P15863 534 aa17.8■□□□□ 0.44
LSM6-207ENST00000515311 CDKN1AP38936 164 aa17.8■□□□□ 0.44
LSM6-207ENST00000515311 GNG3P63215 75 aa17.8■□□□□ 0.44
LSM6-207ENST00000515311 MAB21L1Q13394 359 aa17.8■□□□□ 0.44
LSM6-207ENST00000515311 NEU4Q8WWR8 484 aaPredicted RBP17.8■□□□□ 0.44
LSM6-207ENST00000515311 ORAI1Q96D31 301 aa17.8■□□□□ 0.44
LSM6-207ENST00000515311 RNF170Q96K19 258 aa17.8■□□□□ 0.44
LSM6-207ENST00000515311 MEGF10Q96KG7 1140 aa17.8■□□□□ 0.44
LSM6-207ENST00000515311 SORCS2Q96PQ0 1159 aa17.8■□□□□ 0.44
LSM6-207ENST00000515311 CHCHD6Q9BRQ6 235 aa17.8■□□□□ 0.44
LSM6-207ENST00000515311 FGF23Q9GZV9 251 aaPredicted RBP17.8■□□□□ 0.44
LSM6-207ENST00000515311 TMEM138Q9NPI0 162 aa17.8■□□□□ 0.44
LSM6-207ENST00000515311 DECR2Q9NUI1 292 aa17.8■□□□□ 0.44
LSM6-207ENST00000515311 ZNF701Q9NV72 531 aaPredicted RBP17.8■□□□□ 0.44
LSM6-207ENST00000515311 TXNL4BQ9NX01 149 aaKnown RBP17.8■□□□□ 0.44
LSM6-207ENST00000515311 GSTK1Q9Y2Q3 226 aa17.8■□□□□ 0.44
LSM6-207ENST00000515311 CHD3Q12873 2000 aaKnown RBP17.79■□□□□ 0.44
LSM6-207ENST00000515311 LOC100289279A0A1B0GTE1 492 aa17.79■□□□□ 0.44
LSM6-207ENST00000515311 PQLC2LA1A4F0 135 aa17.79■□□□□ 0.44
LSM6-207ENST00000515311 AIREO43918 545 aa17.79■□□□□ 0.44
LSM6-207ENST00000515311 OCMP0CE72 109 aaPredicted RBP17.79■□□□□ 0.44
LSM6-207ENST00000515311 TNFRSF1AP19438 455 aa17.79■□□□□ 0.44
LSM6-207ENST00000515311 SRMP19623 302 aa17.79■□□□□ 0.44
LSM6-207ENST00000515311 AZGP1P25311 298 aaKnown RBP17.79■□□□□ 0.44
LSM6-207ENST00000515311 CALRP27797 417 aaKnown RBP17.79■□□□□ 0.44
LSM6-207ENST00000515311 THBS2P35442 1172 aa17.79■□□□□ 0.44
LSM6-207ENST00000515311 GATA4P43694 442 aa17.79■□□□□ 0.44
LSM6-207ENST00000515311 FUT6P51993 359 aa17.79■□□□□ 0.44
LSM6-207ENST00000515311 CCL8P80075 99 aa17.79■□□□□ 0.44
LSM6-207ENST00000515311 BLMHQ13867 455 aa17.79■□□□□ 0.44
LSM6-207ENST00000515311 FAM76BQ5HYJ3 339 aa17.79■□□□□ 0.44
LSM6-207ENST00000515311 C22orf42Q6IC83 251 aa17.79■□□□□ 0.44
LSM6-207ENST00000515311 LURAP1Q96LR2 239 aa17.79■□□□□ 0.44
LSM6-207ENST00000515311 SLITRK2Q9H156 845 aa17.79■□□□□ 0.44
LSM6-207ENST00000515311 SAP30LQ9HAJ7 183 aa17.79■□□□□ 0.44
LSM6-207ENST00000515311 TCF7L1Q9HCS4 588 aa17.79■□□□□ 0.44
LSM6-207ENST00000515311 EXOSC4Q9NPD3 245 aaKnown RBP17.79■□□□□ 0.44
LSM6-207ENST00000515311 ITPR2Q14571 2701 aa17.79■□□□□ 0.44
LSM6-207ENST00000515311 TANC2Q9HCD6 1990 aa17.79■□□□□ 0.44
LSM6-207ENST00000515311 POLQO75417 2590 aa17.78■□□□□ 0.44
LSM6-207ENST00000515311 TRAV1-2A0A0B4J238 106 aa17.78■□□□□ 0.44
LSM6-207ENST00000515311 LOC100506127A0A0U1RQW1 187 aa17.78■□□□□ 0.44
LSM6-207ENST00000515311 ZNF732B4DXR9 585 aa17.78■□□□□ 0.44
LSM6-207ENST00000515311 NCR1O76036 304 aa17.78■□□□□ 0.44
LSM6-207ENST00000515311 ALDOBP05062 364 aa17.78■□□□□ 0.44
LSM6-207ENST00000515311 GPM6AP51674 278 aa17.78■□□□□ 0.44
LSM6-207ENST00000515311 DMRTC1Q5HYR2 192 aa17.78■□□□□ 0.44
LSM6-207ENST00000515311 LHFPL2Q6ZUX7 228 aa17.78■□□□□ 0.44
LSM6-207ENST00000515311 WDR86Q86TI4 376 aa17.78■□□□□ 0.44
LSM6-207ENST00000515311 ANKRD13BQ86YJ7 626 aa17.78■□□□□ 0.44
LSM6-207ENST00000515311 OR51A2Q8NGJ7 313 aa17.78■□□□□ 0.44
LSM6-207ENST00000515311 NPRL2Q8WTW4 380 aa17.78■□□□□ 0.44
LSM6-207ENST00000515311 ITLN1Q8WWA0 313 aa17.78■□□□□ 0.44
LSM6-207ENST00000515311 NINJ1Q92982 152 aa17.78■□□□□ 0.44
LSM6-207ENST00000515311 CPNE2Q96FN4 548 aaPredicted RBP17.78■□□□□ 0.44
LSM6-207ENST00000515311 SNTG1Q9NSN8 517 aa17.78■□□□□ 0.44
LSM6-207ENST00000515311 PLEKHA6Q9Y2H5 1048 aa17.78■□□□□ 0.44
LSM6-207ENST00000515311 LRP5LA4QPB2 252 aa17.77■□□□□ 0.44
LSM6-207ENST00000515311 MEGF11A6BM72 1044 aa17.77■□□□□ 0.44
LSM6-207ENST00000515311 MAGEB3O15480 346 aa17.77■□□□□ 0.44
LSM6-207ENST00000515311 TPD52L2O43399 206 aaKnown RBP17.77■□□□□ 0.44
LSM6-207ENST00000515311 DNASE1P24855 282 aa17.77■□□□□ 0.44
LSM6-207ENST00000515311 BDKRB2P30411 391 aa17.77■□□□□ 0.44
LSM6-207ENST00000515311 RBP2P50120 134 aa17.77■□□□□ 0.44
LSM6-207ENST00000515311 EFNA4P52798 201 aa17.77■□□□□ 0.44
LSM6-207ENST00000515311 MRPS11P82912 194 aaKnown RBP17.77■□□□□ 0.44
LSM6-207ENST00000515311 GPR107Q5VW38 600 aa17.77■□□□□ 0.44
LSM6-207ENST00000515311 SLC16A12Q6ZSM3 486 aa17.77■□□□□ 0.44
LSM6-207ENST00000515311 SATL1Q86VE3 508 aa17.77■□□□□ 0.44
LSM6-207ENST00000515311 ZNF573Q86YE8 665 aa17.77■□□□□ 0.44
LSM6-207ENST00000515311 NKAIN3Q8N8D7 197 aa17.77■□□□□ 0.44
LSM6-207ENST00000515311 TRMT10AQ8TBZ6 339 aaKnown RBP17.77■□□□□ 0.44
LSM6-207ENST00000515311 RPL3LQ92901 407 aaKnown RBP17.77■□□□□ 0.44
LSM6-207ENST00000515311 ERGIC1Q969X5 290 aa17.77■□□□□ 0.44
LSM6-207ENST00000515311 BORCS8Q96FH0 119 aa17.77■□□□□ 0.44
LSM6-207ENST00000515311 KCTD7Q96MP8 289 aa17.77■□□□□ 0.44
LSM6-207ENST00000515311 TLNRD1Q9H1K6 362 aa17.77■□□□□ 0.44
LSM6-207ENST00000515311 BEX4Q9NWD9 120 aaPredicted RBP17.77■□□□□ 0.44
LSM6-207ENST00000515311 FAM230AA0A1W2PPH8 454 aa17.76■□□□□ 0.43
LSM6-207ENST00000515311 GABARAPO95166 117 aa17.76■□□□□ 0.43
LSM6-207ENST00000515311 F12P00748 615 aaPredicted RBP17.76■□□□□ 0.43
LSM6-207ENST00000515311 HCKP08631 526 aa17.76■□□□□ 0.43
LSM6-207ENST00000515311 MYL9P24844 172 aa17.76■□□□□ 0.43
LSM6-207ENST00000515311 ZNF154Q13106 437 aa17.76■□□□□ 0.43
LSM6-207ENST00000515311 SPRNQ5BIV9 151 aa17.76■□□□□ 0.43
LSM6-207ENST00000515311 LRRTM1Q86UE6 522 aa17.76■□□□□ 0.43
LSM6-207ENST00000515311 CDH26Q8IXH8 852 aa17.76■□□□□ 0.43
LSM6-207ENST00000515311 MBD6Q96DN6 1003 aa17.76■□□□□ 0.43
LSM6-207ENST00000515311 CENPOQ9BU64 300 aa17.76■□□□□ 0.43
LSM6-207ENST00000515311 GSX2Q9BZM3 304 aa17.76■□□□□ 0.43
LSM6-207ENST00000515311 OR51I2Q9H344 312 aa17.76■□□□□ 0.43
LSM6-207ENST00000515311 NBPF19A0A087WUL8 3843 aa17.76■□□□□ 0.43
LSM6-207ENST00000515311 USF3Q68DE3 2245 aa17.75■□□□□ 0.43
LSM6-207ENST00000515311 NAV2Q8IVL1 2488 aa17.75■□□□□ 0.43
LSM6-207ENST00000515311 HPXP02790 462 aa17.75■□□□□ 0.43
LSM6-207ENST00000515311 GRPP07492 148 aa17.75■□□□□ 0.43
LSM6-207ENST00000515311 MTNR1BP49286 362 aa17.75■□□□□ 0.43
LSM6-207ENST00000515311 ATP1B3P54709 279 aa17.75■□□□□ 0.43
LSM6-207ENST00000515311 MTCP1P56278 107 aa17.75■□□□□ 0.43
LSM6-207ENST00000515311 KISS1Q15726 138 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms