RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 TAS2R39P59534 338 aa3.48□□□□□ -1.85
RFC1-216ENST00000514572 HMGCS1Q01581 520 aa3.48□□□□□ -1.85
RFC1-216ENST00000514572 POU2AF1Q16633 256 aa3.48□□□□□ -1.85
RFC1-216ENST00000514572 PTPN20Q4JDL3 420 aa3.48□□□□□ -1.85
RFC1-216ENST00000514572 GCSAMLQ5JQS6 135 aa3.48□□□□□ -1.85
RFC1-216ENST00000514572 ABHD13Q7L211 337 aa3.48□□□□□ -1.85
RFC1-216ENST00000514572 ARHGAP18Q8N392 663 aa3.48□□□□□ -1.85
RFC1-216ENST00000514572 OR51E1Q8TCB6 317 aa3.48□□□□□ -1.85
RFC1-216ENST00000514572 OR8D1Q8WZ84 308 aa3.48□□□□□ -1.85
RFC1-216ENST00000514572 RNF145Q96MT1 663 aa3.48□□□□□ -1.85
RFC1-216ENST00000514572 ZNF317Q96PQ6 595 aaPredicted RBP3.48□□□□□ -1.85
RFC1-216ENST00000514572 MAP1LC3CQ9BXW4 147 aa3.48□□□□□ -1.85
RFC1-216ENST00000514572 CD84Q9UIB8 345 aa3.48□□□□□ -1.85
RFC1-216ENST00000514572 PRG3Q9Y2Y8 225 aaPredicted RBP3.48□□□□□ -1.85
RFC1-216ENST00000514572 MYH9P35579 1960 aaKnown RBP3.48□□□□□ -1.85
RFC1-216ENST00000514572 FRYQ5TBA9 3013 aa3.48□□□□□ -1.85
RFC1-216ENST00000514572 CROCCQ5TZA2 2017 aa3.48□□□□□ -1.85
RFC1-216ENST00000514572 DOCK5Q9H7D0 1870 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 PLXNA4Q9HCM2 1894 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 GCN1Q92616 2671 aaKnown RBP3.47□□□□□ -1.85
RFC1-216ENST00000514572 NRCAMQ92823 1304 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 BPTFQ12830 3046 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 SPAG17Q6Q759 2223 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 KIAA1671Q9BY89 1806 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 ACACAQ13085 2346 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 LAMA1P25391 3075 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 IGHV3-64DA0A0J9YX35 117 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 ANKRD65E5RJM6 399 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 H7C1H1 209 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 M0QZ92 97 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 CD5LO43866 347 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 NMT2O60551 498 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 ACTL6AO96019 429 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 SMIM10L2AP0DMW4 78 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 SMIM10L2BP0DMW5 78 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 CCL2P13500 99 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 ZNF19P17023 458 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 PFN2P35080 140 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 CEACAM3P40198 252 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 CXCL5P42830 114 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 CD151P48509 253 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 NMUP48645 174 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 NOVP48745 357 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 SMARCB1Q12824 385 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 PRPSAP1Q14558 356 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 PON2Q15165 354 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 RGNQ15493 299 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 VAMP3Q15836 100 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 TMEM183BQ1AE95 376 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 C12orf54Q6X4T0 127 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 TMEM183AQ8IXX5 376 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 FAM71AQ8IYT1 594 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 CHST4Q8NCG5 386 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 DUSP18Q8NEJ0 188 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 NOXO1Q8NFA2 376 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 OR6Q1Q8NGQ2 317 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 LILRB4Q8NHJ6 448 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 IL22RA2Q969J5 263 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 FAM131CQ96AQ9 280 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 GPR21Q99679 349 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 CHAC1Q9BUX1 264 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 CHRNA10Q9GZZ6 450 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 CSNK1G1Q9HCP0 422 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 SLC39A1Q9NY26 324 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 IFNKQ9P0W0 207 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 NUFIP1Q9UHK0 495 aaKnown RBP3.47□□□□□ -1.85
RFC1-216ENST00000514572 TP53TG3Q9ULZ0 132 aa3.47□□□□□ -1.85
RFC1-216ENST00000514572 NBEAQ8NFP9 2946 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 H7C417 338 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 K7ERQ8 282 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 YKT6O15498 198 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 SS18L1O75177 396 aaPredicted RBP3.46□□□□□ -1.86
RFC1-216ENST00000514572 EIF4EP06730 217 aaKnown RBP3.46□□□□□ -1.86
RFC1-216ENST00000514572 RETP07949 1114 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 CDKN2BP42772 138 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 CSNK1A1P48729 337 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 ZNF136P52737 540 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 PSMC5P62195 406 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 YWHAEP62258 255 aaKnown RBP3.46□□□□□ -1.86
RFC1-216ENST00000514572 ALX1Q15699 326 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 THEM4Q5T1C6 240 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 RWDD4Q6NW29 188 aaKnown RBP3.46□□□□□ -1.86
RFC1-216ENST00000514572 PID1Q7Z2X4 250 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 UNC93AQ86WB7 457 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 ST13P4Q8IZP2 240 aaPredicted RBP3.46□□□□□ -1.86
RFC1-216ENST00000514572 CCDC54Q8NEL0 328 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 BLOC1S5Q8TDH9 187 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 ESR2Q92731 530 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 SGTBQ96EQ0 304 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 ZNF681Q96N22 645 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 TAAR1Q96RJ0 339 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 UQCC2Q9BRT2 126 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 PARP12Q9H0J9 701 aaKnown RBP3.46□□□□□ -1.86
RFC1-216ENST00000514572 RAB1BQ9H0U4 201 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 STMN3Q9NZ72 180 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 DEC1Q9P2X7 70 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 MTFP1Q9UDX5 166 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 FLVCR2Q9UPI3 526 aa3.46□□□□□ -1.86
RFC1-216ENST00000514572 RBMX2Q9Y388 322 aaKnown RBP3.46□□□□□ -1.86
RFC1-216ENST00000514572 SPTA1P02549 2419 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms