RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 CCDC54Q8NEL0 328 aa11.71□□□□□ -0.54
USP46-209ENST00000514536 OR5A2Q8NGI9 324 aa11.71□□□□□ -0.54
USP46-209ENST00000514536 RPL3LQ92901 407 aaKnown RBP11.71□□□□□ -0.54
USP46-209ENST00000514536 CHCHD3Q9NX63 227 aaKnown RBP11.71□□□□□ -0.54
USP46-209ENST00000514536 CAB39Q9Y376 341 aaPredicted RBP11.71□□□□□ -0.54
USP46-209ENST00000514536 YLPM1P49750 1951 aaKnown RBP11.7□□□□□ -0.54
USP46-209ENST00000514536 TMEM210A6NLX4 147 aa11.7□□□□□ -0.54
USP46-209ENST00000514536 OR4C45A6NMZ5 311 aa11.7□□□□□ -0.54
USP46-209ENST00000514536 DHRS7CA6NNS2 312 aa11.7□□□□□ -0.54
USP46-209ENST00000514536 PIPP12273 146 aaPredicted RBP11.7□□□□□ -0.54
USP46-209ENST00000514536 CD80P33681 288 aa11.7□□□□□ -0.54
USP46-209ENST00000514536 GTF2A1P52655 376 aaPredicted RBP11.7□□□□□ -0.54
USP46-209ENST00000514536 MRPL28Q13084 256 aaKnown RBP11.7□□□□□ -0.54
USP46-209ENST00000514536 FAM76BQ5HYJ3 339 aa11.7□□□□□ -0.54
USP46-209ENST00000514536 TMEM42Q69YG0 159 aa11.7□□□□□ -0.54
USP46-209ENST00000514536 AHSA2Q719I0 299 aa11.7□□□□□ -0.54
USP46-209ENST00000514536 MUC20Q8N307 709 aaPredicted RBP11.7□□□□□ -0.54
USP46-209ENST00000514536 STX19Q8N4C7 294 aa11.7□□□□□ -0.54
USP46-209ENST00000514536 GCSAMQ8N6F7 178 aa11.7□□□□□ -0.54
USP46-209ENST00000514536 ZNF676Q8N7Q3 588 aa11.7□□□□□ -0.54
USP46-209ENST00000514536 SCCPDHQ8NBX0 429 aa11.7□□□□□ -0.54
USP46-209ENST00000514536 LRRC29Q8WV35 223 aa11.7□□□□□ -0.54
USP46-209ENST00000514536 TMEM246Q9BRR3 403 aa11.7□□□□□ -0.54
USP46-209ENST00000514536 TLNRD1Q9H1K6 362 aa11.7□□□□□ -0.54
USP46-209ENST00000514536 PLEKHA1Q9HB21 404 aa11.7□□□□□ -0.54
USP46-209ENST00000514536 PATZ1Q9HBE1 687 aaKnown RBP11.7□□□□□ -0.54
USP46-209ENST00000514536 CNOT2Q9NZN8 540 aaKnown RBP11.7□□□□□ -0.54
USP46-209ENST00000514536 TLN2Q9Y4G6 2542 aa11.69□□□□□ -0.54
USP46-209ENST00000514536 TANC2Q9HCD6 1990 aa11.69□□□□□ -0.54
USP46-209ENST00000514536 C3orf80F5H4A9 247 aa11.69□□□□□ -0.54
USP46-209ENST00000514536 LGALS8O00214 317 aa11.69□□□□□ -0.54
USP46-209ENST00000514536 PLPP2O43688 288 aa11.69□□□□□ -0.54
USP46-209ENST00000514536 LHBP01229 141 aa11.69□□□□□ -0.54
USP46-209ENST00000514536 ISG15P05161 165 aa11.69□□□□□ -0.54
USP46-209ENST00000514536 VHLP40337 213 aa11.69□□□□□ -0.54
USP46-209ENST00000514536 HSPA13P48723 471 aa11.69□□□□□ -0.54
USP46-209ENST00000514536 GNG3P63215 75 aa11.69□□□□□ -0.54
USP46-209ENST00000514536 MED21Q13503 144 aa11.69□□□□□ -0.54
USP46-209ENST00000514536 WDR82Q6UXN9 313 aa11.69□□□□□ -0.54
USP46-209ENST00000514536 GATAD2BQ8WXI9 593 aa11.69□□□□□ -0.54
USP46-209ENST00000514536 OR51I2Q9H344 312 aa11.69□□□□□ -0.54
USP46-209ENST00000514536 KCNS2Q9ULS6 477 aa11.69□□□□□ -0.54
USP46-209ENST00000514536 HIVEP2P31629 2446 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 TRBV2A0A0J9YWF9 115 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 ANKRD61A6NGH8 418 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 OR5B21A6NL26 309 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 CEACAM18A8MTB9 384 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 PTGES3LE9PB15 166 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 FSTL3O95633 263 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 MSMBP08118 114 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 WNT2P09544 360 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 ZNF12P17014 697 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 EGR1P18146 543 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 MYF6P23409 242 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 C21orf33P30042 268 aaPredicted RBP11.68□□□□□ -0.54
USP46-209ENST00000514536 TGM4P49221 684 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 ZNF404Q494X3 552 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 XAF1Q6GPH4 301 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 OR10AC1Q8NH08 325 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 OR51F2Q8NH61 342 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 OR5AK2Q8NH90 309 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 FGGYQ96C11 551 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 PDCD1LG2Q9BQ51 273 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 ANKRD60Q9BZ19 345 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 FKBP14Q9NWM8 211 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 BABAM2Q9NXR7 383 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 ERVK-18Q9QC07 812 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 HHLA2Q9UM44 414 aa11.68□□□□□ -0.54
USP46-209ENST00000514536 IGHV3OR15-7A0A075B7D8 119 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 OOEPA6NGQ2 149 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 SLC1A7O00341 560 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 ZFPL1O95159 310 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 SERPINA3P01011 423 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 CCDC159P0C7I6 412 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 CFHR2P36980 270 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 DVL1P1P54792 670 aaPredicted RBP11.67□□□□□ -0.54
USP46-209ENST00000514536 GMFBP60983 142 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 SEC61A1P61619 476 aaKnown RBP11.67□□□□□ -0.54
USP46-209ENST00000514536 LCN2P80188 198 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 UBE2V2Q15819 145 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 RPL22L1Q6P5R6 122 aaKnown RBP11.67□□□□□ -0.54
USP46-209ENST00000514536 LYPD2Q6UXB3 125 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 GLCCI1Q86VQ1 547 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 PIP4P2Q8N4L2 257 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 OR51A4Q8NGJ6 313 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 OR52N1Q8NH53 320 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 TRMT10AQ8TBZ6 339 aaKnown RBP11.67□□□□□ -0.54
USP46-209ENST00000514536 HAVCR2Q8TDQ0 301 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 NPRL2Q8WTW4 380 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 TMEM186Q96B77 213 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 C10orf35Q96D05 121 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 ADAT3Q96EY9 351 aaPredicted RBP11.67□□□□□ -0.54
USP46-209ENST00000514536 COMMD4Q9H0A8 199 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 HIF1ANQ9NWT6 349 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 SCN3BQ9NY72 215 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 MIOXQ9UGB7 285 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 SIRT4Q9Y6E7 314 aaPredicted RBP11.67□□□□□ -0.54
USP46-209ENST00000514536 TRAV38-1A0A0B4J264 116 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 FAM230AA0A1W2PPH8 454 aa11.67□□□□□ -0.54
USP46-209ENST00000514536 PQLC2LA1A4F0 135 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms