RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 KCNJ8Q15842 424 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 ESCO2Q56NI9 601 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 KLF17Q5JT82 389 aaPredicted RBP8.07□□□□□ -1.12
RNF4-221ENST00000513643 WDR38Q5JTN6 314 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 BCL2L15Q5TBC7 163 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 OGFRL1Q5TC84 451 aaPredicted RBP8.07□□□□□ -1.12
RNF4-221ENST00000513643 SFRP4Q6FHJ7 346 aaPredicted RBP8.07□□□□□ -1.12
RNF4-221ENST00000513643 USP43Q70EL4 1123 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 DOK3Q7L591 496 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 ZDHHC23Q8IYP9 409 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 TEX29Q8N6K0 151 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 ACBD7Q8N6N7 88 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 SCCPDHQ8NBX0 429 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 CCDC54Q8NEL0 328 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 OR10H4Q8NGA5 316 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 OR2G2Q8NGZ5 317 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 FBLIM1Q8WUP2 373 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 RAB40AQ8WXH6 277 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 PIGCQ92535 297 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 RNF170Q96K19 258 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 TBX5Q99593 518 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 RTL8AQ9BWD3 113 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 C7orf69Q9H7B7 122 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 ENPP5Q9UJA9 477 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 PIGLQ9Y2B2 252 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 MYRFQ9Y2G1 1151 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 PCDHGB1Q9Y5G3 927 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 A0A0A6YYJ9 748 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 OR5B21A6NL26 309 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 SNTNA6NMZ2 147 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 C3orf80F5H4A9 247 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 P2RY10O00398 339 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 RHBDL1O75783 438 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 NRASP01111 189 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 ADRA2CP18825 462 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 MPZP25189 248 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 OR12D2P58182 307 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 ERVK11-1P61568 191 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 ELF3P78545 371 aaPredicted RBP8.06□□□□□ -1.12
RNF4-221ENST00000513643 GABPB1Q06547 395 aaPredicted RBP8.06□□□□□ -1.12
RNF4-221ENST00000513643 RAB40BQ12829 278 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 GALEQ14376 348 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 TP53I3Q53FA7 332 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 CLVS2Q5SYC1 327 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 ZNF691Q5VV52 312 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 STUMQ69YW2 141 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 LAIR2Q6ISS4 152 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 ZNF771Q7L3S4 317 aaPredicted RBP8.06□□□□□ -1.12
RNF4-221ENST00000513643 NLRC3Q7RTR2 1065 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 SYS1Q8N2H4 156 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 YIPF7Q8N8F6 280 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 LY6G5BQ8NDX9 201 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 OR8B3Q8NGG8 313 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 SPATA3Q8NHX4 192 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 ANGPTL6Q8NI99 470 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 LRRC29Q8WV35 223 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 AQP3Q92482 292 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 RPL3LQ92901 407 aaKnown RBP8.06□□□□□ -1.12
RNF4-221ENST00000513643 STMN2Q93045 179 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 UPRTQ96BW1 309 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 C10orf35Q96D05 121 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 SEH1LQ96EE3 360 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 PELI1Q96FA3 418 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 FAM71F1Q96KD3 344 aaPredicted RBP8.06□□□□□ -1.12
RNF4-221ENST00000513643 DMRTB1Q96MA1 342 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 Q96MT0 163 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 OR8B2Q96RD0 313 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 DNTTIP1Q9H147 329 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 WDR13Q9H1Z4 485 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 SMURF1Q9HCE7 757 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 FGF20Q9NP95 211 aaPredicted RBP8.06□□□□□ -1.12
RNF4-221ENST00000513643 INPP5EQ9NRR6 644 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 ACOXLQ9NUZ1 547 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 FRRS1LQ9P0K9 344 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 METRNQ9UJH8 293 aa8.06□□□□□ -1.12
RNF4-221ENST00000513643 A6NLC8 198 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 OR4C45A6NMZ5 311 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 ZNF732B4DXR9 585 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 ANKRD65E5RJM6 399 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 RPP14O95059 124 aaKnown RBP8.05□□□□□ -1.12
RNF4-221ENST00000513643 GYPAP02724 150 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 LIMS3P0CW19 117 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 LIMS4P0CW20 117 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 MMP9P14780 707 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 PEX2P28328 305 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 ATP6V1E1P36543 226 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 SRP14P37108 136 aaKnown RBP8.05□□□□□ -1.12
RNF4-221ENST00000513643 GPM6AP51674 278 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 GNB2P62879 340 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 RCN1Q15293 331 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 UBE2V2Q15819 145 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 SMN1Q16637 294 aaKnown RBP8.05□□□□□ -1.12
RNF4-221ENST00000513643 MICBQ29980 383 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 KRTAP24-1Q3LI83 254 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 CEP78Q5JTW2 689 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 ZNF788Q6ZQV5 615 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 C9orf139Q6ZV77 190 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 MOB3CQ70IA8 216 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 RDH10Q8IZV5 341 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 OR52I1Q8NGK6 324 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms