RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 ZMAT5Q9UDW3 170 aaKnown RBP8.76□□□□□ -1.01
DDX41-216ENST00000513562 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.76□□□□□ -1.01
DDX41-216ENST00000513562 LSM4Q9Y4Z0 139 aaKnown RBP8.76□□□□□ -1.01
DDX41-216ENST00000513562 ENPP4Q9Y6X5 453 aa8.76□□□□□ -1.01
DDX41-216ENST00000513562 V9GYY5 206 aaPredicted RBP8.76□□□□□ -1.01
DDX41-216ENST00000513562 TRBV4-1A0A0J9YWV2 114 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 hCG_1809904A0A1W2PP81 198 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 A0A1W2PPE2 198 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 A0A1W2PR64 198 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 A0A1W2PRV1 198 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 ZNF878C9JN71 531 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 ZNF682O95780 498 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 H1F0P07305 194 aaKnown RBP8.75□□□□□ -1.01
DDX41-216ENST00000513562 CCDC159P0C7I6 412 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 GLRA1P23415 457 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 CFL1P23528 166 aaKnown RBP8.75□□□□□ -1.01
DDX41-216ENST00000513562 AZGP1P25311 298 aaKnown RBP8.75□□□□□ -1.01
DDX41-216ENST00000513562 PYCR1P32322 319 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 DGCR2P98153 550 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 SEC23BQ15437 767 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 TAF13Q15543 124 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 SNCBQ16143 134 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 SSX2Q16385 188 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 FGD3Q5JSP0 725 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 ZNF626Q68DY1 528 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 LYPD4Q6UWN0 246 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 CBLL1Q75N03 491 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 PRSS45Q7RTY3 260 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 FTMTQ8N4E7 242 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 HPSE2Q8WWQ2 592 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 SLAMF6Q96DU3 332 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 HSH2DQ96JZ2 352 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 OR52D1Q9H346 318 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 ABCB9Q9NP78 766 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 KRCC1Q9NPI7 259 aaPredicted RBP8.75□□□□□ -1.01
DDX41-216ENST00000513562 CENPMQ9NSP4 180 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 GAR1Q9NY12 217 aaKnown RBP8.75□□□□□ -1.01
DDX41-216ENST00000513562 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.75□□□□□ -1.01
DDX41-216ENST00000513562 MPC1Q9Y5U8 109 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 COMMD3-BMI1R4GMX3 469 aa8.75□□□□□ -1.01
DDX41-216ENST00000513562 TVP23AA6NH52 213 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 FAM90A22PA8MWA6 464 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 MRASO14807 208 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 ARG1P05089 322 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 ANXA2P07355 339 aaKnown RBP8.74□□□□□ -1.01
DDX41-216ENST00000513562 CX3CR1P49238 355 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 CAPZA1P52907 286 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 PRDX4Q13162 271 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 ZNF273Q14593 569 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 DMRTC1Q5HYR2 192 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 KHDC1LQ5JSQ8 128 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 C10orf99Q6UWK7 81 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 FKBP9P1Q75LS8 142 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 THAP5Q7Z6K1 395 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 CALHM1Q8IU99 346 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 PROKR2Q8NFJ6 384 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 OR11H6Q8NGC7 330 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 ZNRF4Q8WWF5 429 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 FUZQ9BT04 418 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 IFT27Q9BW83 186 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 YY1AP1Q9H869 796 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 TMBIM4Q9HC24 238 aa8.74□□□□□ -1.01
DDX41-216ENST00000513562 ZNF850A8MQ14 1090 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 BBIP1A8MTZ0 92 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 C17orf98A8MV24 154 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 IDH3BO43837 385 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 RAMP3O60896 148 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 MTRF1O75570 445 aaKnown RBP8.73□□□□□ -1.01
DDX41-216ENST00000513562 CST4P01036 141 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 SPARCP09486 303 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 JUNBP17275 347 aaPredicted RBP8.73□□□□□ -1.01
DDX41-216ENST00000513562 ACKR3P25106 362 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 SLC15A1P46059 708 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 THBS3P49746 956 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 ENTPD1P49961 510 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 DLX6P56179 175 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 GRB2P62993 217 aaKnown RBP8.73□□□□□ -1.01
DDX41-216ENST00000513562 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.73□□□□□ -1.01
DDX41-216ENST00000513562 METTL21CQ5VZV1 264 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 ZNF770Q6IQ21 691 aaPredicted RBP8.73□□□□□ -1.01
DDX41-216ENST00000513562 UNQ9370/PRO34162Q6UXP9 181 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 KCTD8Q6ZWB6 473 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 C16orf82Q7Z2V1 217 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 OR4M1Q8NGD0 313 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 OR51D1Q8NGF3 324 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 OR52H1Q8NGJ2 320 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 OR13D1Q8NGV5 346 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 OR2T4Q8NH00 348 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 TFAP2CQ92754 450 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 DHRS1Q96LJ7 313 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 RGCCQ9H4X1 137 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 SP140LQ9H930 580 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 NDUFAF4Q9P032 175 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 ZNF319Q9P2F9 582 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 GMPR2Q9P2T1 348 aaKnown RBP8.73□□□□□ -1.01
DDX41-216ENST00000513562 CD300AQ9UGN4 299 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 RAB21Q9UL25 225 aa8.73□□□□□ -1.01
DDX41-216ENST00000513562 DHRS12A0PJE2 317 aa8.72□□□□□ -1.01
DDX41-216ENST00000513562 CXCR6O00574 342 aa8.72□□□□□ -1.01
DDX41-216ENST00000513562 SERPINA1P01009 418 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms