RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 OR9K2Q8NGE7 335 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 LMX1AQ8TE12 382 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 RPEQ96AT9 228 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 ISG20Q96AZ6 181 aaKnown RBP0.28□□□□□ -2.36
PDGFC-208ENST00000512711 RAD51AP1Q96B01 352 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 EMC6Q9BV81 110 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 LRRC40Q9H9A6 602 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 DDX19BQ9UMR2 479 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 ROS1P08922 2347 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 UBN2Q6ZU65 1347 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 TRPM6Q9BX84 2022 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 MDC1Q14676 2089 aaKnown RBP0.27□□□□□ -2.37
PDGFC-208ENST00000512711 A0A0G2JMP0 313 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 A0A0X1KG70 313 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 ZNF729A6NN14 1252 aaPredicted RBP0.27□□□□□ -2.37
PDGFC-208ENST00000512711 A8MWP4 228 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 ANKRD65E5RJM6 399 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 LSM1O15116 133 aaKnown RBP0.27□□□□□ -2.37
PDGFC-208ENST00000512711 SLC16A7O60669 478 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 SERPINA3P01011 423 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 DESP17661 470 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 NCF2P19878 526 aaPredicted RBP0.27□□□□□ -2.37
PDGFC-208ENST00000512711 EIF2S2P20042 333 aaKnown RBP0.27□□□□□ -2.37
PDGFC-208ENST00000512711 TAGLN2P37802 199 aaKnown RBP0.27□□□□□ -2.37
PDGFC-208ENST00000512711 SLC1A2P43004 574 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 HNMTP50135 292 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 LRRC23Q53EV4 343 aaPredicted RBP0.27□□□□□ -2.37
PDGFC-208ENST00000512711 HORMAD1Q86X24 394 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 UBE2J2Q8N2K1 259 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 RPRMLQ8N4K4 120 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 RNF10Q8N5U6 811 aaKnown RBP0.27□□□□□ -2.37
PDGFC-208ENST00000512711 OR4A4PQ8NGN8 299 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 TBC1D31Q96DN5 1066 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 RDH12Q96NR8 316 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 TBL1XR1Q9BZK7 514 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 ANKRA2Q9H9E1 313 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 HEBP1Q9NRV9 189 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 PTTG3PQ9NZH4 202 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 ZNF257Q9Y2Q1 563 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 TRAPPC1Q9Y5R8 145 aa0.27□□□□□ -2.37
PDGFC-208ENST00000512711 MIA3Q5JRA6 1907 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 IGKV1D-37A0A075B6S9 117 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 TRBV9A0A0B4J1U6 114 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 IGHV6-1A0A0B4J1U7 121 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 ISLRO14498 428 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 NDC80O14777 642 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 SLC31A1O15431 190 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 CTAG2O75638 210 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 RAB36O95755 333 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 CXorf1O96002 111 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 HBE1P02100 147 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 CDK1P06493 297 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 SLC2A3P11169 496 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 BCKDHBP21953 392 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 TEAD1P28347 426 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 RRM2P31350 389 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 MAGEA6P43360 314 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 GRB2P62993 217 aaKnown RBP0.26□□□□□ -2.37
PDGFC-208ENST00000512711 ENDOGQ14249 297 aaKnown RBP0.26□□□□□ -2.37
PDGFC-208ENST00000512711 ZMYND11Q15326 602 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 PPP1R7Q15435 360 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 XKR7Q5GH72 579 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 N4BP2L1Q5TBK1 243 aaPredicted RBP0.26□□□□□ -2.37
PDGFC-208ENST00000512711 ZYG11AQ6WRX3 759 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 Q6ZQT7 251 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 Q6ZRN7 208 aaPredicted RBP0.26□□□□□ -2.37
PDGFC-208ENST00000512711 CPNE9Q8IYJ1 553 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 OR9G4Q8NGQ1 327 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 OR4K13Q8NH42 304 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 SNF8Q96H20 258 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 FAM19A4Q96LR4 140 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 ZBTB18Q99592 522 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 TEAD3Q99594 435 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 CENPKQ9BS16 269 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 ACTR3CQ9C0K3 210 aaPredicted RBP0.26□□□□□ -2.37
PDGFC-208ENST00000512711 LRRC19Q9H756 370 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 METTL7AQ9H8H3 244 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 TMEM100Q9NV29 134 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 AK9Q5TCS8 1911 aa0.26□□□□□ -2.37
PDGFC-208ENST00000512711 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.25□□□□□ -2.37
PDGFC-208ENST00000512711 SMCO3A2RU48 225 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 RGS5O15539 181 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 CTNSO60931 367 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 CRTAPO75718 401 aaPredicted RBP0.25□□□□□ -2.37
PDGFC-208ENST00000512711 CLTAP09496 248 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 CXCR1P25024 350 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 TNNT2P45379 298 aaPredicted RBP0.25□□□□□ -2.37
PDGFC-208ENST00000512711 ERFP50548 548 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 PSG4Q00888 419 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 ZNF33AQ06730 810 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 INCA1Q0VD86 236 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 MAPRE2Q15555 327 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 OR1Q1Q15612 314 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 CCDC183Q5T5S1 534 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 TTC23LQ6PF05 361 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 ZCCHC24Q8N2G6 241 aaKnown RBP0.25□□□□□ -2.37
PDGFC-208ENST00000512711 DEFB119Q8N690 84 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 NECAB1Q8N987 351 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 GPR119Q8TDV5 335 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 BLNKQ8WV28 456 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms