RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 RAB18Q9NP72 206 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 MMP17Q9ULZ9 603 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 PLXNB3Q9ULL4 1909 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 FPR2P25090 351 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 HOXA1P49639 335 aaPredicted RBP13.21□□□□□ -0.29
USP38-202ENST00000510377 RRADP55042 308 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 MALLQ13021 153 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 KISS1Q15726 138 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 ZNF260Q3ZCT1 412 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 SLC22A25Q6T423 547 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 BEND4Q6ZU67 534 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.21□□□□□ -0.29
USP38-202ENST00000510377 SLC22A18ASQ8N1D0 253 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 NELFAQ9H3P2 528 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 COL4A6Q14031 1691 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 NUDT19A8MXV4 375 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 TAAR5O14804 337 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 IGHV3-9P01782 118 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 TTRP02766 147 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 C4orf17Q53FE4 359 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 NCMAPQ5T1S8 102 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 PLXDC2Q6UX71 529 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 LINC00114Q6XXX2 140 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 OR1N1Q8NGS0 311 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 HAS2Q92819 552 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 SGK3Q96BR1 496 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 OR6C1Q96RD1 312 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 RAB33BQ9H082 229 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 CUL9Q8IWT3 2517 aa13.21□□□□□ -0.29
USP38-202ENST00000510377 MPTX1A8MV57 137 aa13.21□□□□□ -0.3
USP38-202ENST00000510377 ST8SIA3O43173 380 aa13.21□□□□□ -0.3
USP38-202ENST00000510377 TXNDC12O95881 172 aa13.21□□□□□ -0.3
USP38-202ENST00000510377 S100PP25815 95 aa13.21□□□□□ -0.3
USP38-202ENST00000510377 HTR5AP47898 357 aa13.21□□□□□ -0.3
USP38-202ENST00000510377 AWAT1Q58HT5 328 aa13.21□□□□□ -0.3
USP38-202ENST00000510377 OR2A2Q6IF42 318 aa13.21□□□□□ -0.3
USP38-202ENST00000510377 C9orf40Q8IXQ3 194 aa13.21□□□□□ -0.3
USP38-202ENST00000510377 OR8B12Q8NGG6 310 aa13.21□□□□□ -0.3
USP38-202ENST00000510377 OR1L3Q8NH93 324 aa13.21□□□□□ -0.3
USP38-202ENST00000510377 RPS4Y2Q8TD47 263 aa13.21□□□□□ -0.3
USP38-202ENST00000510377 GABRG3Q99928 467 aa13.21□□□□□ -0.3
USP38-202ENST00000510377 IGLV1-36A0A0B4J1U3 117 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 C1QL1O75973 258 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 IFNA4P05014 189 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 KLK3P07288 261 aaPredicted RBP13.2□□□□□ -0.3
USP38-202ENST00000510377 ALDH3B1P43353 468 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 SRYQ05066 204 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 THEM4Q5T1C6 240 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 ZNF561Q8N587 486 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 FAAP24Q9BTP7 215 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 ZNF286AQ9HBT8 521 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 SVILO95425 2214 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 A0A1W2PPC4 97 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 NPIPB9F8W1W9 429 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 H3BMH7 237 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 ADAM10O14672 748 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 OR2J2O76002 312 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 F10P00742 488 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 CST4P01036 141 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 FOLR1P15328 257 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 GGNBP1Q5YKI7 109 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 DRAM2Q6UX65 266 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 ETV3LQ6ZN32 361 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 HIST2H3AQ71DI3 136 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 VWCEQ96DN2 955 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 HDHD3Q9BSH5 251 aaPredicted RBP13.2□□□□□ -0.3
USP38-202ENST00000510377 UNKLQ9H9P5 680 aaKnown RBP13.2□□□□□ -0.3
USP38-202ENST00000510377 ALKBH4Q9NXW9 302 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 SCRG1O75711 98 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 MNX1P50219 401 aaPredicted RBP13.2□□□□□ -0.3
USP38-202ENST00000510377 DEFA6Q01524 100 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 MISPQ8IVT2 679 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 OR2AE1Q8NHA4 323 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 OR14L1PQ8NHC6 308 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 OR10C1Q96KK4 312 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 RTN4RQ9BZR6 473 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 CST7O76096 145 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 TMEM123Q8N131 208 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 NAA11Q9BSU3 229 aaPredicted RBP13.2□□□□□ -0.3
USP38-202ENST00000510377 SEC11CQ9BY50 192 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 AUP1Q9Y679 476 aa13.2□□□□□ -0.3
USP38-202ENST00000510377 SRFP11831 508 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 MRPS34P82930 218 aaKnown RBP13.19□□□□□ -0.3
USP38-202ENST00000510377 RSPO4Q2I0M5 234 aaPredicted RBP13.19□□□□□ -0.3
USP38-202ENST00000510377 NKAIN1Q4KMZ8 207 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 BMPERQ8N8U9 685 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 PLPP5Q8NEB5 264 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 GJC3Q8NFK1 279 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 OR8U1Q8NH10 309 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 MRPL24Q96A35 216 aaKnown RBP13.19□□□□□ -0.3
USP38-202ENST00000510377 C9J4A7 227 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 H3BP45 60 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 M0R135 149 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 RAB5CP51148 216 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 HMGN3Q15651 99 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 PABPC1L2AQ5JQF8 200 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 TMEM268Q5VZI3 342 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 LGI3Q8N145 548 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 ASB10Q8WXI3 467 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 ST8SIA1Q92185 356 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms