RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 OSGIN2Q9Y236 505 aa15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 SDCBPO00560 298 aaPredicted RBP15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 TNFSF11O14788 317 aa15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 HTR3BO95264 441 aa15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 SUCLG1P53597 346 aaKnown RBP15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 PPA1Q15181 289 aa15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 RSPO1Q2MKA7 263 aaPredicted RBP15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 AADACL3Q5VUY0 350 aa15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 CRIP3Q6Q6R5 217 aa15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 Q6ZSR3 168 aa15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 OR2Y1Q8NGV0 311 aa15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 STOML3Q8TAV4 291 aa15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 PIGTQ969N2 578 aa15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 IER2Q9BTL4 223 aa15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 RNF126Q9BV68 326 aa15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 METTL8Q9H825 291 aaKnown RBP15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 NCOA6Q14686 2063 aaPredicted RBP15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 A0A0J9YW62 118 aa15.71■□□□□ 0.11
CCHCR1-228ENST00000509552 KCNAB3O43448 404 aa15.71■□□□□ 0.11
CCHCR1-228ENST00000509552 ADAP1O75689 374 aa15.71■□□□□ 0.11
CCHCR1-228ENST00000509552 DUSP3P51452 185 aaPredicted RBP15.71■□□□□ 0.11
CCHCR1-228ENST00000509552 PLEKHN1Q494U1 663 aaPredicted RBP15.71■□□□□ 0.11
CCHCR1-228ENST00000509552 C20orf196Q8IYI0 205 aa15.71■□□□□ 0.11
CCHCR1-228ENST00000509552 OR52H1Q8NGJ2 320 aa15.71■□□□□ 0.11
CCHCR1-228ENST00000509552 SH2D2AQ9NP31 389 aa15.71■□□□□ 0.11
CCHCR1-228ENST00000509552 F8VVB4 439 aa15.71■□□□□ 0.1
CCHCR1-228ENST00000509552 F8VWA3 439 aa15.71■□□□□ 0.1
CCHCR1-228ENST00000509552 CA11O75493 328 aa15.71■□□□□ 0.1
CCHCR1-228ENST00000509552 DBHP09172 617 aa15.71■□□□□ 0.1
CCHCR1-228ENST00000509552 CCL4P13236 92 aa15.71■□□□□ 0.1
CCHCR1-228ENST00000509552 HOXA6P31267 233 aa15.71■□□□□ 0.1
CCHCR1-228ENST00000509552 MLF1P58340 268 aa15.71■□□□□ 0.1
CCHCR1-228ENST00000509552 SUPT4H1P63272 117 aaKnown RBP15.71■□□□□ 0.1
CCHCR1-228ENST00000509552 MRPS34P82930 218 aaKnown RBP15.71■□□□□ 0.1
CCHCR1-228ENST00000509552 SURF2Q15527 256 aaPredicted RBP15.71■□□□□ 0.1
CCHCR1-228ENST00000509552 FAM27BQ5VT28 67 aa15.71■□□□□ 0.1
CCHCR1-228ENST00000509552 ZIC4Q8N9L1 334 aa15.71■□□□□ 0.1
CCHCR1-228ENST00000509552 MAFIPQ8WZ33 124 aa15.71■□□□□ 0.1
CCHCR1-228ENST00000509552 EMG1Q92979 244 aaKnown RBP15.71■□□□□ 0.1
CCHCR1-228ENST00000509552 CYYR1Q96J86 154 aa15.71■□□□□ 0.1
CCHCR1-228ENST00000509552 SF3B5Q9BWJ5 86 aaKnown RBP15.71■□□□□ 0.1
CCHCR1-228ENST00000509552 FOLR3P41439 243 aa15.7■□□□□ 0.1
CCHCR1-228ENST00000509552 NSUN5P2Q63ZY6 315 aa15.7■□□□□ 0.1
CCHCR1-228ENST00000509552 SEMA6DQ8NFY4 1073 aa15.7■□□□□ 0.1
CCHCR1-228ENST00000509552 RHBDD1Q8TEB9 315 aa15.7■□□□□ 0.1
CCHCR1-228ENST00000509552 MARC2Q969Z3 335 aa15.7■□□□□ 0.1
CCHCR1-228ENST00000509552 FBXO17Q96EF6 278 aa15.7■□□□□ 0.1
CCHCR1-228ENST00000509552 ZC4H2Q9NQZ6 224 aa15.7■□□□□ 0.1
CCHCR1-228ENST00000509552 ZNF701Q9NV72 531 aaPredicted RBP15.7■□□□□ 0.1
CCHCR1-228ENST00000509552 C14orf166Q9Y224 244 aaKnown RBP15.7■□□□□ 0.1
CCHCR1-228ENST00000509552 FIGNL2A6NMB9 653 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 DNPH1O43598 174 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 PET100P0DJ07 73 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 GLRA1P23415 457 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 MC2RQ01718 297 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 NAAAQ02083 359 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 ZNF273Q14593 569 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 ANKRD55Q3KP44 614 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 PRSS54Q6PEW0 395 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 UQCC3Q6UW78 93 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 GALNTL5Q7Z4T8 443 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 BAP18Q8IXM2 172 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 NTNG2Q96CW9 530 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 NARS2Q96I59 477 aaKnown RBP15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 C12orf4Q9NQ89 552 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 PLEKHJ1Q9NW61 149 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 NTN3O00634 580 aaPredicted RBP15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 SERPINA5P05154 406 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 ECI1P42126 302 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 DEFA5Q01523 94 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 AIMP2Q13155 320 aaKnown RBP15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 DRAM2Q6UX65 266 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 ZSCAN4Q8NAM6 433 aaPredicted RBP15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 BPIFCQ8NFQ6 507 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 SGK3Q96BR1 496 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 CPNE2Q96FN4 548 aaPredicted RBP15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 ZC3H10Q96K80 434 aaKnown RBP15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 SRXN1Q9BYN0 137 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 PRR13Q9NZ81 148 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 PCDHB10Q9UN67 800 aa15.69■□□□□ 0.1
CCHCR1-228ENST00000509552 H0YIZ8 118 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 SGCEO43556 437 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 TMEM225BP0DP42 221 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 GABRR1P24046 479 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 MTCP1P56278 107 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 RAC3P60763 192 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 RAB35Q15286 201 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 SNAI3Q3KNW1 292 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 WDR5BQ86VZ2 330 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 UBALD2Q8IYN6 164 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 SLC30A7Q8NEW0 376 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 ROBO4Q8WZ75 1007 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 SGCZQ96LD1 299 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 C2orf50Q96LR7 162 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 FAM117AQ9C073 453 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 GPR173Q9NS66 373 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 ASF1BQ9NVP2 202 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 RAB19A4D1S5 217 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 DHRS7CA6NNS2 312 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 LYL1P12980 280 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms