RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 PPIAL4FP0DN26 164 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 RPS2P15880 293 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 FAHP16930 419 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 ADRA2CP18825 462 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 GATA3P23771 443 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 DCKP27707 260 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 ATP6V1E1P36543 226 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 MAP2K4P45985 399 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 RPS11P62280 158 aaKnown RBP eCLIP7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 MZT1Q08AG7 82 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 ZNF829Q3KNS6 432 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 FAM201AQ5SY85 155 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 TMEM42Q69YG0 159 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 KLBQ86Z14 1044 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 PHC2Q8IXK0 858 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 SYS1Q8N2H4 156 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 NANOGP1Q8N7R0 232 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 DEFB108BQ8NET1 73 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 OR52H1Q8NGJ2 320 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 NANPQ8TBE9 248 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 ZNF418Q8TF45 676 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 GATAD2BQ8WXI9 593 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 ORAI1Q96D31 301 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 ITPKCQ96DU7 683 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 ADAT3Q96EY9 351 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 TMEM80Q96HE8 168 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 PGLYRP3Q96LB9 341 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 ADAT1Q9BUB4 502 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 OR10A2Q9H208 303 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 FN3KRPQ9HA64 309 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 PATZ1Q9HBE1 687 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 OR5V1Q9UGF6 321 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 PPIAL4AQ9Y536 164 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 SNX5Q9Y5X3 404 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 MXRA5Q9NR99 2828 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 IGKV1-27A0A075B6S5 117 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 IGKV1-9A0A0C4DH69 117 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 LOC107986453A0A1B0GWG9 222 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 EFCAB10A6NFE3 127 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 ACOD1A6NK06 481 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 A6NLC8 198 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 CEACAM18A8MTB9 384 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 OGG1O15527 345 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 GMDSO60547 372 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 PTBP3O95758 552 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 GRPP07492 148 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 CCDC159P0C7I6 412 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 EGR1P18146 543 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 ZFP36P26651 326 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 CSNK2BP67870 215 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 ALKBH1Q13686 389 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 INSL4Q14641 139 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 CDK5R1Q15078 307 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 UBE2V2Q15819 145 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 KRTAP24-1Q3LI83 254 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 KLHL22Q53GT1 634 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 BCL2L15Q5TBC7 163 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 DMKNQ6E0U4 476 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 ZNF826PQ6ZT77 177 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 NLRC3Q7RTR2 1065 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 BPIFB2Q8N4F0 458 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 SPERTQ8NA61 448 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 C19orf18Q8NEA5 215 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 OR8S1Q8NH09 359 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 ERGIC1Q969X5 290 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 SEH1LQ96EE3 360 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 NKX3-1Q99801 234 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 MRI1Q9BV20 369 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 C19orf24Q9BVV8 132 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 TMPRSS13Q9BYE2 586 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 VCX3BQ9H321 246 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 OPA3Q9H6K4 179 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 TMEM165Q9HC07 324 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 INPP5EQ9NRR6 644 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 C14orf119Q9NWQ9 140 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 MRPL15Q9P015 296 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 MIOXQ9UGB7 285 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 GTF2A1LQ9UNN4 478 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 CAB39Q9Y376 341 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 EXOSC1Q9Y3B2 195 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 AUP1Q9Y679 476 aa7.32□□□□□ -1.24
PDLIM5-213ENST00000509357 PNMA8CA0A1B0GUJ8 204 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 hCG_1807616A0A1W2PRN6 198 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 ANKRD61A6NGH8 418 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 ZNF850A8MQ14 1090 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 DHRS3O75911 302 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 CST4P01036 141 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 AVPP01185 164 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 TFF1P04155 84 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 EPHA1P21709 976 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 CFL1P23528 166 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 FPR2P25090 351 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 GNALP38405 381 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 DDOSTP39656 456 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 CD200P41217 278 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 HSPA13P48723 471 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 TGM4P49221 684 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 GP2P55259 537 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 SEC61A1P61619 476 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms