RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 MICBQ29980 383 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 PGAP1Q75T13 922 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 MARCH1Q8TCQ1 289 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 SGK3Q96BR1 496 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 SIGLEC12Q96PQ1 595 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 ST6GALNAC5Q9BVH7 336 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 SLCO5A1Q9H2Y9 848 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 LDAHQ9H6V9 325 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 GPR173Q9NS66 373 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 TNFSF18Q9UNG2 199 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 ZNF716A6NP11 495 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 ATP6V1G2-DDX39BF2Z307 99 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 SDCBPO00560 298 aaPredicted RBP12.68□□□□□ -0.38
DDX41-208ENST00000507955 VAMP5O95183 116 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 GP1BAP07359 652 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 ERCC1P07992 297 aaPredicted RBP12.68□□□□□ -0.38
DDX41-208ENST00000507955 VAMP1P23763 118 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 ZBTB25P24278 435 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 SRD5A2P31213 254 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 CYB561P49447 251 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 C20orf196Q8IYI0 205 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 KCNRGQ8N5I3 272 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 OR51T1Q8NGJ9 327 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 OR4K15Q8NH41 348 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 FBXW5Q969U6 566 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 PLEKHA6Q9Y2H5 1048 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 R4GN57 208 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 DISC1C4P0D8 188 aa12.67□□□□□ -0.38
DDX41-208ENST00000507955 ANGPTL7O43827 346 aa12.67□□□□□ -0.38
DDX41-208ENST00000507955 APOC3P02656 99 aa12.67□□□□□ -0.38
DDX41-208ENST00000507955 PTGFRP43088 359 aa12.67□□□□□ -0.38
DDX41-208ENST00000507955 CAPZA1P52907 286 aa12.67□□□□□ -0.38
DDX41-208ENST00000507955 C11orf87Q6NUJ2 197 aa12.67□□□□□ -0.38
DDX41-208ENST00000507955 KCTD9Q7L273 389 aa12.67□□□□□ -0.38
DDX41-208ENST00000507955 BATF2Q8N1L9 274 aa12.67□□□□□ -0.38
DDX41-208ENST00000507955 PPP1R1CQ8WVI7 109 aa12.67□□□□□ -0.38
DDX41-208ENST00000507955 LRFN1Q9P244 771 aa12.67□□□□□ -0.38
DDX41-208ENST00000507955 UBBP0CG47 229 aa12.67□□□□□ -0.38
DDX41-208ENST00000507955 NPY4RP50391 375 aa12.67□□□□□ -0.38
DDX41-208ENST00000507955 RPS27AP62979 156 aaKnown RBP12.67□□□□□ -0.38
DDX41-208ENST00000507955 UBA52P62987 128 aaKnown RBP12.67□□□□□ -0.38
DDX41-208ENST00000507955 SRSF4Q08170 494 aaKnown RBP12.67□□□□□ -0.38
DDX41-208ENST00000507955 SSPNQ14714 243 aa12.67□□□□□ -0.38
DDX41-208ENST00000507955 CLVS2Q5SYC1 327 aa12.67□□□□□ -0.38
DDX41-208ENST00000507955 CDCP2Q5VXM1 449 aa12.67□□□□□ -0.38
DDX41-208ENST00000507955 LINC00696Q6ZRV3 163 aa12.67□□□□□ -0.38
DDX41-208ENST00000507955 KCNG3Q8TAE7 436 aa12.67□□□□□ -0.38
DDX41-208ENST00000507955 SSC4DQ8WTU2 575 aa12.67□□□□□ -0.38
DDX41-208ENST00000507955 ASB13Q8WXK3 278 aa12.67□□□□□ -0.38
DDX41-208ENST00000507955 VRK1Q99986 396 aaPredicted RBP12.67□□□□□ -0.38
DDX41-208ENST00000507955 SLC25A32Q9H2D1 315 aa12.67□□□□□ -0.38
DDX41-208ENST00000507955 SPRY1O43609 319 aaPredicted RBP12.66□□□□□ -0.38
DDX41-208ENST00000507955 DHRS3O75911 302 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 SP9P0CG40 484 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 HIST1H1DP16402 221 aaKnown RBP12.66□□□□□ -0.38
DDX41-208ENST00000507955 ZNF32P17041 273 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 ZNF84P51523 738 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 CHAF1BQ13112 559 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 ELP2Q6IA86 826 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 MOB3CQ70IA8 216 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 AAED1Q7RTV5 226 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 SLC25A42Q86VD7 318 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 BOLLQ8N9W6 283 aaKnown RBP12.66□□□□□ -0.38
DDX41-208ENST00000507955 SGCEO43556 437 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 HTR3BO95264 441 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 IGLV3-1P01715 115 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 IFNA6P05013 189 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 ICAM2P13598 275 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 CTSSP25774 331 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 DLSTP36957 453 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 IL13RA1P78552 427 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 ARFRP1Q13795 201 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 CEACAM16Q2WEN9 425 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 FAM27BQ5VT28 67 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 DBX2Q6ZNG2 339 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 PDCD10Q9BUL8 212 aa12.66□□□□□ -0.38
DDX41-208ENST00000507955 A0A0D9SG52 128 aa12.65□□□□□ -0.38
DDX41-208ENST00000507955 FAM166BA8MTA8 275 aa12.65□□□□□ -0.38
DDX41-208ENST00000507955 TOR1AO14656 332 aa12.65□□□□□ -0.38
DDX41-208ENST00000507955 ZNF205O95201 554 aa12.65□□□□□ -0.38
DDX41-208ENST00000507955 BLVRBP30043 206 aaPredicted RBP12.65□□□□□ -0.38
DDX41-208ENST00000507955 HIST1H3AP68431 136 aa12.65□□□□□ -0.38
DDX41-208ENST00000507955 FOXO1Q12778 655 aa12.65□□□□□ -0.38
DDX41-208ENST00000507955 HIST2H3PS2Q5TEC6 136 aa12.65□□□□□ -0.38
DDX41-208ENST00000507955 BRICD5Q6PL45 260 aa12.65□□□□□ -0.38
DDX41-208ENST00000507955 DHRS13Q6UX07 377 aa12.65□□□□□ -0.38
DDX41-208ENST00000507955 HIST2H3AQ71DI3 136 aa12.65□□□□□ -0.38
DDX41-208ENST00000507955 LYG2Q86SG7 212 aa12.65□□□□□ -0.38
DDX41-208ENST00000507955 ARMC10Q8N2F6 343 aa12.65□□□□□ -0.38
DDX41-208ENST00000507955 PRRT1Q99946 306 aa12.65□□□□□ -0.38
DDX41-208ENST00000507955 HDHD3Q9BSH5 251 aaPredicted RBP12.65□□□□□ -0.38
DDX41-208ENST00000507955 SLC2A8Q9NY64 477 aa12.65□□□□□ -0.38
DDX41-208ENST00000507955 FAM230AA0A1W2PPH8 454 aa12.65□□□□□ -0.38
DDX41-208ENST00000507955 C9orf170A2RU37 121 aa12.65□□□□□ -0.38
DDX41-208ENST00000507955 DNASE2O00115 360 aaPredicted RBP12.65□□□□□ -0.38
DDX41-208ENST00000507955 CDX4O14627 284 aaPredicted RBP12.65□□□□□ -0.38
DDX41-208ENST00000507955 BCL2L11O43521 198 aa12.65□□□□□ -0.38
DDX41-208ENST00000507955 LCATP04180 440 aa12.65□□□□□ -0.38
DDX41-208ENST00000507955 SLC25A4P12235 298 aa12.65□□□□□ -0.38
DDX41-208ENST00000507955 GABRR1P24046 479 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms