RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 HSPD1P10809 573 aaKnown RBP1.81□□□□□ -2.12
LSM6-205ENST00000507449 IL3RAP26951 378 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 GNRHRP30968 328 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 ARL2P36404 184 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 HCCSP53701 268 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 SP6Q3SY56 376 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 CAVIN4Q5BKX8 364 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 MFSD14CQ5VZR4 134 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 C16orf87Q6PH81 154 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 DEGS2Q6QHC5 323 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 EPGNQ6UW88 154 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 STK40Q8N2I9 435 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 SLC25A29Q8N8R3 303 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 TMEM104Q8NE00 496 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 NAPGQ99747 312 aaPredicted RBP1.81□□□□□ -2.12
LSM6-205ENST00000507449 MARVELD1Q9BSK0 173 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 ARMC7Q9H6L4 198 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 TAS2R5Q9NYW4 299 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 SBNO1A3KN83 1393 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 ANKRD12Q6UB98 2062 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 IGHV2OR16-5A0A0B4J2B6 119 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 H0YC42 278 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 UPK1BO75841 260 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 TRAPPC6AO75865 159 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 GATBO75879 557 aaKnown RBP1.8□□□□□ -2.12
LSM6-205ENST00000507449 PLEKHA8P1O95397 391 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 ETHE1O95571 254 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 IGKV1-39P01597 117 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 IGKV1D-39P04432 117 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 NELFEP18615 380 aaKnown RBP1.8□□□□□ -2.12
LSM6-205ENST00000507449 PAX6P26367 422 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 PSMB5P28074 263 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 GALR1P47211 349 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 MLF1P58340 268 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 TAS2R43P59537 309 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 SLC35A1P78382 337 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 SLC35B1P78383 322 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 FUT5Q11128 374 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 FAM53BQ14153 422 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 KLHL12Q53G59 568 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 PRR9Q5T870 116 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 CPTPQ5TA50 214 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 PP632Q6XCG6 107 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 OR2Z1Q8NG97 314 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 CACNG8Q8WXS5 425 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 TMEM159Q96B96 161 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 ALS2CR12Q96Q35 445 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 C20orf144Q9BQM9 153 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 FANCEQ9HB96 536 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 SND1-IT1Q9HBX3 110 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 BRWD3Q6RI45 1802 aa1.8□□□□□ -2.12
LSM6-205ENST00000507449 J3QT63 122 aa1.79□□□□□ -2.12
LSM6-205ENST00000507449 IGLV3-19P01714 112 aa1.79□□□□□ -2.12
LSM6-205ENST00000507449 STAG3L2P0CL84 134 aa1.79□□□□□ -2.12
LSM6-205ENST00000507449 ATP5J2P56134 94 aa1.79□□□□□ -2.12
LSM6-205ENST00000507449 C16orf47Q6ZP98 133 aaPredicted RBP1.79□□□□□ -2.12
LSM6-205ENST00000507449 SLC7A5P1Q8MH63 180 aa1.79□□□□□ -2.12
LSM6-205ENST00000507449 LYPD1Q8N2G4 141 aa1.79□□□□□ -2.12
LSM6-205ENST00000507449 ARHGAP18Q8N392 663 aa1.79□□□□□ -2.12
LSM6-205ENST00000507449 CYB561A3Q8NBI2 242 aa1.79□□□□□ -2.12
LSM6-205ENST00000507449 OR2M7Q8NG81 312 aa1.79□□□□□ -2.12
LSM6-205ENST00000507449 OR4M2Q8NGB6 313 aa1.79□□□□□ -2.12
LSM6-205ENST00000507449 OR52K1Q8NGK4 314 aa1.79□□□□□ -2.12
LSM6-205ENST00000507449 OR10Z1Q8NGY1 313 aa1.79□□□□□ -2.12
LSM6-205ENST00000507449 OR51A7Q8NH64 312 aa1.79□□□□□ -2.12
LSM6-205ENST00000507449 KLF14Q8TD94 323 aaPredicted RBP1.79□□□□□ -2.12
LSM6-205ENST00000507449 GPR82Q96P67 336 aa1.79□□□□□ -2.12
LSM6-205ENST00000507449 CTRCQ99895 268 aa1.79□□□□□ -2.12
LSM6-205ENST00000507449 RHOXF2Q9BQY4 288 aa1.79□□□□□ -2.12
LSM6-205ENST00000507449 DHCR7Q9UBM7 475 aaKnown RBP1.79□□□□□ -2.12
LSM6-205ENST00000507449 SCN1AP35498 2009 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 TNIKQ9UKE5 1360 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 LOC102724200A0A096LPH7 203 aaPredicted RBP1.78□□□□□ -2.12
LSM6-205ENST00000507449 TRAV8-4A0A0B4J246 113 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 TRAV8-6A0A0B4J262 113 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 A0A0J9YYE9 177 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 ZNF98A6NK75 572 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 CEACAM18A8MTB9 384 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.78□□□□□ -2.12
LSM6-205ENST00000507449 OR7C2O60412 319 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 CSTAP01040 98 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 IGKV1D-16P01601 117 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 P01737 135 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 TRBC1P01850 177 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 SLC35G6P0C7Q6 338 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 GDI2P50395 445 aaKnown RBP1.78□□□□□ -2.12
LSM6-205ENST00000507449 CARD18P57730 90 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 MTPNP58546 118 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 PPP1CAP62136 330 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 RBX1P62877 108 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 RPL31P62899 125 aaKnown RBP1.78□□□□□ -2.12
LSM6-205ENST00000507449 ATP6V1FQ16864 119 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 HNRNPA1L2Q32P51 320 aaKnown RBP1.78□□□□□ -2.12
LSM6-205ENST00000507449 NDUFAF6Q330K2 333 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 PRSS54Q6PEW0 395 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 ORMDL3Q8N138 153 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 LINC00337Q8N6G1 96 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 APCDD1LQ8NCL9 501 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 SFXN5Q8TD22 340 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 ZNF721Q8TF20 911 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms