RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 H2AFY2Q9P0M6 372 aaPredicted RBP11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 POMPQ9Y244 141 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 MDFIC2A0A1B0GVS7 189 aa11.9□□□□□ -0.5
HMGCS1-203ENST00000507004 SLC22A31A6NKX4 558 aa11.9□□□□□ -0.5
HMGCS1-203ENST00000507004 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.9□□□□□ -0.5
HMGCS1-203ENST00000507004 M0R1W7 72 aa11.9□□□□□ -0.5
HMGCS1-203ENST00000507004 GLRA1P23415 457 aa11.9□□□□□ -0.5
HMGCS1-203ENST00000507004 RIDAP52758 137 aaKnown RBP11.9□□□□□ -0.5
HMGCS1-203ENST00000507004 APOFQ13790 326 aa11.9□□□□□ -0.5
HMGCS1-203ENST00000507004 OCLNQ16625 522 aa11.9□□□□□ -0.5
HMGCS1-203ENST00000507004 CEACAM21Q3KPI0 293 aa11.9□□□□□ -0.5
HMGCS1-203ENST00000507004 RUSC1-AS1Q66K80 236 aa11.9□□□□□ -0.5
HMGCS1-203ENST00000507004 ZNF788Q6ZQV5 615 aa11.9□□□□□ -0.5
HMGCS1-203ENST00000507004 BCAS4Q8TDM0 211 aa11.9□□□□□ -0.5
HMGCS1-203ENST00000507004 OR8B4Q96RC9 309 aa11.9□□□□□ -0.5
HMGCS1-203ENST00000507004 TVP23BQ9NYZ1 205 aa11.9□□□□□ -0.5
HMGCS1-203ENST00000507004 ONECUT1Q9UBC0 465 aa11.9□□□□□ -0.5
HMGCS1-203ENST00000507004 NLKQ9UBE8 527 aa11.9□□□□□ -0.5
HMGCS1-203ENST00000507004 NUFIP1Q9UHK0 495 aaKnown RBP11.9□□□□□ -0.5
HMGCS1-203ENST00000507004 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.9□□□□□ -0.5
HMGCS1-203ENST00000507004 MGAM2Q2M2H8 2515 aa11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 TRBV23-1A0A0A0MS06 115 aa11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 A0A1W2PPH5 198 aa11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 CLPSL1A2RUU4 121 aa11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 SIGLEC5O15389 551 aa11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 MDKP21741 143 aaPredicted RBP11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 PRKACGP22612 351 aa11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 ACKR3P25106 362 aa11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 OLFML2AQ68BL7 652 aa11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 FAHD1Q6P587 224 aa11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 VMO1Q7Z5L0 202 aa11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 COMMD2Q86X83 199 aa11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 FAM216BQ8N7L0 139 aa11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 DTX3Q8N9I9 347 aa11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 OR5K1Q8NHB7 308 aa11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 ANGPTL6Q8NI99 470 aa11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 RPL3LQ92901 407 aaKnown RBP11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 CNN2Q99439 309 aaKnown RBP11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 CHIAQ9BZP6 476 aa11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 FAM206AQ9NX38 181 aa11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 SLC25A10Q9UBX3 287 aaPredicted RBP11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 ENPP5Q9UJA9 477 aa11.89□□□□□ -0.51
HMGCS1-203ENST00000507004 OR2AT4A6NND4 320 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 DHRS7CA6NNS2 312 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 DHRS3O75911 302 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 ACAA1P09110 424 aaPredicted RBP11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 FCGR1AP12314 374 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 IER3P46695 156 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 HOXA4Q00056 320 aaPredicted RBP11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 ACSM1Q08AH1 577 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 POU4F2Q12837 409 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 IKZF1Q13422 519 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 PTGES3Q15185 160 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 NXNL2Q5VZ03 156 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 TREML4Q6UXN2 200 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 GID4Q8IVV7 300 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 HS3ST5Q8IZT8 346 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 BBS1Q8NFJ9 593 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 OR5D13Q8NGL4 314 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 OR5R1Q8NH85 324 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 HPSE2Q8WWQ2 592 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 H1FXQ92522 213 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 LYZL4Q96KX0 146 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 PBOV1Q9GZY1 135 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 OR51I2Q9H344 312 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 METTL8Q9H825 291 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 C1RLQ9NZP8 487 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 IKZF2Q9UKS7 526 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 POLDIP2Q9Y2S7 368 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 SOX21Q9Y651 276 aaPredicted RBP11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 TENM1Q9UKZ4 2725 aa11.88□□□□□ -0.51
HMGCS1-203ENST00000507004 ZNF732B4DXR9 585 aa11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 TIMM23O14925 209 aa11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 AKR7A2O43488 359 aa11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 ATP5HO75947 161 aa11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 PAHP00439 452 aa11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 IGLV3-1P01715 115 aa11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 GPM6AP51674 278 aa11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 EGR3Q06889 387 aa11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 SMIM21Q3B7S5 101 aa11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 ZNF684Q5T5D7 378 aa11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 TMEM236Q5W0B7 351 aa11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 MEPCEQ7L2J0 689 aaKnown RBP11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 ZNF573Q86YE8 665 aa11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 ZDHHC13Q8IUH4 622 aa11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 CCDC54Q8NEL0 328 aa11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 SLC7A6OSQ96CW6 309 aaPredicted RBP11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 GAFA1Q96PS6 74 aa11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 GPR84Q9NQS5 396 aa11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 KRT84Q9NSB2 600 aa11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 KLHDC2Q9Y2U9 406 aa11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 SF3B6Q9Y3B4 125 aaKnown RBP11.87□□□□□ -0.51
HMGCS1-203ENST00000507004 A0A0U1RQK1 487 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 hCG_1809904A0A1W2PP81 198 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 A0A1W2PPE2 198 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 A0A1W2PQ09 198 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 A0A1W2PR64 198 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 A0A1W2PRV1 198 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 CCDC182A6NF36 153 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 ZNF670-ZNF695F2Z2N8 137 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms