RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 VSX2P58304 361 aaPredicted RBP2□□□□□ -2.09
SSBP2-206ENST00000506960 EIF3EP60228 445 aaKnown RBP2□□□□□ -2.09
SSBP2-206ENST00000506960 UBE2NP61088 152 aaKnown RBP2□□□□□ -2.09
SSBP2-206ENST00000506960 SOHLH1Q5JUK2 328 aa2□□□□□ -2.09
SSBP2-206ENST00000506960 ARMC12Q5T9G4 340 aa2□□□□□ -2.09
SSBP2-206ENST00000506960 RAET1LQ5VY80 246 aa2□□□□□ -2.09
SSBP2-206ENST00000506960 SLC16A14Q7RTX9 510 aa2□□□□□ -2.09
SSBP2-206ENST00000506960 SNX20Q7Z614 316 aa2□□□□□ -2.09
SSBP2-206ENST00000506960 TMEM150AQ86TG1 271 aa2□□□□□ -2.09
SSBP2-206ENST00000506960 MMAAQ8IVH4 418 aaKnown RBP2□□□□□ -2.09
SSBP2-206ENST00000506960 ZFP41Q8N8Y5 198 aa2□□□□□ -2.09
SSBP2-206ENST00000506960 FBXL13Q8NEE6 735 aa2□□□□□ -2.09
SSBP2-206ENST00000506960 OR2A1Q8NGT9 310 aa2□□□□□ -2.09
SSBP2-206ENST00000506960 ZNF721Q8TF20 911 aa2□□□□□ -2.09
SSBP2-206ENST00000506960 ECHDC3Q96DC8 303 aa2□□□□□ -2.09
SSBP2-206ENST00000506960 ZNF681Q96N22 645 aa2□□□□□ -2.09
SSBP2-206ENST00000506960 CAMK2N2Q96S95 79 aa2□□□□□ -2.09
SSBP2-206ENST00000506960 CTRCQ99895 268 aa2□□□□□ -2.09
SSBP2-206ENST00000506960 RTBDNQ9BSG5 229 aaPredicted RBP2□□□□□ -2.09
SSBP2-206ENST00000506960 CXCL16Q9H2A7 254 aa2□□□□□ -2.09
SSBP2-206ENST00000506960 BOLA2Q9H3K6 86 aa2□□□□□ -2.09
SSBP2-206ENST00000506960 SAV1Q9H4B6 383 aaPredicted RBP2□□□□□ -2.09
SSBP2-206ENST00000506960 KCNE3Q9Y6H6 103 aa2□□□□□ -2.09
SSBP2-206ENST00000506960 SCN1AP35498 2009 aa2□□□□□ -2.09
SSBP2-206ENST00000506960 NIPBLQ6KC79 2804 aaeCLIP1.99□□□□□ -2.09
SSBP2-206ENST00000506960 CCDC168Q8NDH2 2452 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 RP1P56715 2156 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 TRAV40A0A0B4J280 105 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 COLCA2A8K830 154 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 I3L4J1 428 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 CDC40O60508 579 aaKnown RBP eCLIP1.99□□□□□ -2.09
SSBP2-206ENST00000506960 KLHL41O60662 606 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 RBBP9O75884 186 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 OR1G1P47890 313 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 HCAR3P49019 387 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 RND2P52198 227 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 RAB10P61026 200 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 PITPNAQ00169 270 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 LOXL1Q08397 574 aaPredicted RBP1.99□□□□□ -2.09
SSBP2-206ENST00000506960 CDH17Q12864 832 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 IFT88Q13099 833 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 DNAJC3Q13217 504 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 PIGHQ14442 188 aaPredicted RBP1.99□□□□□ -2.09
SSBP2-206ENST00000506960 QPRTQ15274 297 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 OR7A5Q15622 319 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 ORMDL2Q53FV1 153 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 ZNF684Q5T5D7 378 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 CCDC183Q5T5S1 534 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 LIN9Q5TKA1 542 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 Q5W150 140 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 SLC25A34Q6PIV7 304 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 FBXW12Q6X9E4 464 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 SHISA6Q6ZSJ9 500 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 HMGN2P46Q86SG4 172 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 WDR86Q86TI4 376 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 PRELID2Q8N945 189 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 OR7G2Q8NG99 324 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 OR4A4PQ8NGN8 299 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 RAB3IL1Q8TBN0 382 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 RGP1Q92546 391 aaPredicted RBP1.99□□□□□ -2.09
SSBP2-206ENST00000506960 ELMO1Q92556 727 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 N4BP2L2Q92802 583 aaPredicted RBP1.99□□□□□ -2.09
SSBP2-206ENST00000506960 SLC38A4Q969I6 547 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 EEF1AKMT3Q96AZ1 226 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 SEH1LQ96EE3 360 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 DNAJC1Q96KC8 554 aaKnown RBP1.99□□□□□ -2.09
SSBP2-206ENST00000506960 RNF157Q96PX1 679 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 TIMM17AQ99595 171 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 CCDC77Q9BR77 488 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 SCRT1Q9BWW7 348 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 FAM192AQ9GZU8 254 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 OR51M1Q9H341 326 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 EDA2RQ9HAV5 297 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 DDX19AQ9NUU7 478 aaKnown RBP1.99□□□□□ -2.09
SSBP2-206ENST00000506960 HYOU1Q9Y4L1 999 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 HES2Q9Y543 173 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 KNTC1P50748 2209 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 ATRQ13535 2644 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 FN1P02751 2386 aaKnown RBP1.99□□□□□ -2.09
SSBP2-206ENST00000506960 NUP210LQ5VU65 1888 aa1.99□□□□□ -2.09
SSBP2-206ENST00000506960 PRRC2CQ9Y520 2896 aaKnown RBP1.98□□□□□ -2.09
SSBP2-206ENST00000506960 ANKRD36A6QL64 1941 aa1.98□□□□□ -2.09
SSBP2-206ENST00000506960 IGLV2-18A0A075B6J9 118 aa1.98□□□□□ -2.09
SSBP2-206ENST00000506960 SIRPB1O00241 398 aa1.98□□□□□ -2.09
SSBP2-206ENST00000506960 CASC3O15234 703 aaKnown RBP1.98□□□□□ -2.09
SSBP2-206ENST00000506960 CCNE2O96020 404 aa1.98□□□□□ -2.09
SSBP2-206ENST00000506960 FTH1P02794 183 aa1.98□□□□□ -2.09
SSBP2-206ENST00000506960 ARG1P05089 322 aa1.98□□□□□ -2.09
SSBP2-206ENST00000506960 EIF4EP06730 217 aaKnown RBP1.98□□□□□ -2.09
SSBP2-206ENST00000506960 CD3GP09693 182 aa1.98□□□□□ -2.09
SSBP2-206ENST00000506960 PABPC4LP0CB38 370 aaKnown RBP1.98□□□□□ -2.09
SSBP2-206ENST00000506960 C1GALT1C1LP0DN25 315 aa1.98□□□□□ -2.09
SSBP2-206ENST00000506960 HSPD1P10809 573 aaKnown RBP1.98□□□□□ -2.09
SSBP2-206ENST00000506960 ERGP11308 486 aa1.98□□□□□ -2.09
SSBP2-206ENST00000506960 HLA-EP13747 358 aa1.98□□□□□ -2.09
SSBP2-206ENST00000506960 CDKN2DP55273 166 aa1.98□□□□□ -2.09
SSBP2-206ENST00000506960 ARPP19P56211 112 aa1.98□□□□□ -2.09
SSBP2-206ENST00000506960 STXBP1P61764 594 aaKnown RBP1.98□□□□□ -2.09
SSBP2-206ENST00000506960 PPP1CBP62140 327 aa1.98□□□□□ -2.09
SSBP2-206ENST00000506960 TGM3Q08188 693 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms