RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 IFNA21P01568 189 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 GALNSP34059 522 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 PPP1CCP36873 323 aaKnown RBP15.07■□□□□ 0
SQSTM1-211ENST00000506690 DHPSP49366 369 aaPredicted RBP15.07■□□□□ 0
SQSTM1-211ENST00000506690 CD81P60033 236 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 FAM189A2Q15884 450 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 DNM1P34Q6PK57 102 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 STX12Q86Y82 276 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 Q8WTZ3 238 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 S100PBPQ96BU1 408 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 CERS4Q9HA82 394 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 TMED7-TICAM2A0A0A6YYA0 188 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 CXorf65A6NEN9 183 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 C17orf105B2RV13 164 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 IFNA10P01566 189 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 CA3P07451 260 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 CXCL1P09341 107 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 GP1BBP13224 206 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 DDTP30046 118 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 APOBEC1P41238 236 aaKnown RBP15.07■□□□□ 0
SQSTM1-211ENST00000506690 HSD17B7P56937 341 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 ACY1Q03154 408 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 HIKESHIQ53FT3 197 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 HIST3H2BBQ8N257 126 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 FAM89BQ8N5H3 189 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 SLAMF6Q96DU3 332 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 C5orf34Q96MH7 638 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 RARRES2Q99969 163 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 ATG2BQ96BY7 2078 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 ZNF727A8MUV8 499 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 NUDT14O95848 222 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 MBPP02686 304 aaPredicted RBP15.06■□□□□ 0
SQSTM1-211ENST00000506690 SOD3P08294 240 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 ZNF20P17024 532 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 BTF3P20290 206 aaKnown RBP15.06■□□□□ 0
SQSTM1-211ENST00000506690 PKIAP61925 76 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 TDGQ13569 410 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 GAMTQ14353 236 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 ZNF674Q2M3X9 581 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 KLHL24Q6TFL4 600 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 WDFY1Q8IWB7 410 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 SGPP2Q8IWX5 399 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 PRR22Q8IZ63 422 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 ADAMTS18Q8TE60 1221 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 ASB10Q8WXI3 467 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 CDH23Q9H251 3354 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 A6NIZ1 184 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 FOXI3A8MTJ6 420 aaPredicted RBP15.06■□□□□ 0
SQSTM1-211ENST00000506690 GPR137BO60478 399 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 CRTAPO75718 401 aaPredicted RBP15.06■□□□□ 0
SQSTM1-211ENST00000506690 SCGB1D2O95969 90 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 PGCP20142 388 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 POLR2HP52434 150 aaKnown RBP15.06■□□□□ 0
SQSTM1-211ENST00000506690 RAP1BP61224 184 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 SFTPA2Q8IWL1 248 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 SNIP1Q8TAD8 396 aaKnown RBP15.06■□□□□ 0
SQSTM1-211ENST00000506690 OR51E1Q8TCB6 317 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 KCNK17Q96T54 332 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 URM1Q9BTM9 101 aaKnown RBP15.06■□□□□ 0
SQSTM1-211ENST00000506690 ZDHHC8Q9ULC8 765 aa15.06■□□□□ 0
SQSTM1-211ENST00000506690 ELOA3CA0A087WX78 387 aaPredicted RBP15.05■□□□□ 0
SQSTM1-211ENST00000506690 FRG2CA6NGY1 282 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 CRYM-AS1A6NIL9 109 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 ZNF724A8MTY0 619 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 ZNF587BE7ETH6 402 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 H3BQ15 152 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 K7N7A8 449 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 PAX1P15863 534 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 NDUFB7P17568 137 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 ECI1P42126 302 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 RUNX3Q13761 415 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 RSU1Q15404 277 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 UBE2V2Q15819 145 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 KHDC3LQ587J8 217 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 GPR157Q5UAW9 335 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 UNQ6494/PRO21346Q6UXR6 183 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 GALNTL5Q7Z4T8 443 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 OOSP2Q86WS3 158 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 OR10S1Q8NGN2 331 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 MFSD8Q8NHS3 518 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 PTPMT1Q8WUK0 201 aaPredicted RBP15.05■□□□□ 0
SQSTM1-211ENST00000506690 RAB39BQ96DA2 213 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 BMFQ96LC9 184 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 GPR61Q9BZJ8 451 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 OR10A2Q9H208 303 aa15.05■□□□□ 0
SQSTM1-211ENST00000506690 TLCD2A6NGC4 264 aa15.05■□□□□ -0
SQSTM1-211ENST00000506690 PPP1R2P9O14990 202 aa15.05■□□□□ -0
SQSTM1-211ENST00000506690 CTSDP07339 412 aaPredicted RBP15.05■□□□□ -0
SQSTM1-211ENST00000506690 LSM6P62312 80 aaKnown RBP15.05■□□□□ -0
SQSTM1-211ENST00000506690 CHRFAM7AQ494W8 412 aa15.05■□□□□ -0
SQSTM1-211ENST00000506690 GFI1BQ5VTD9 330 aa15.05■□□□□ -0
SQSTM1-211ENST00000506690 ZNF343Q6P1L6 599 aa15.05■□□□□ -0
SQSTM1-211ENST00000506690 SULF2Q8IWU5 870 aa15.05■□□□□ -0
SQSTM1-211ENST00000506690 AVL9Q8NBF6 648 aa15.05■□□□□ -0
SQSTM1-211ENST00000506690 APCDD1LQ8NCL9 501 aa15.05■□□□□ -0
SQSTM1-211ENST00000506690 SEMA6DQ8NFY4 1073 aa15.05■□□□□ -0
SQSTM1-211ENST00000506690 SLC46A1Q96NT5 459 aa15.05■□□□□ -0
SQSTM1-211ENST00000506690 GAS2L1Q99501 681 aaPredicted RBP15.05■□□□□ -0
SQSTM1-211ENST00000506690 MED19A0JLT2 244 aaPredicted RBP15.04■□□□□ -0
SQSTM1-211ENST00000506690 NSA2O95478 260 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms