RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 MPPED2Q15777 294 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 SMN1Q16637 294 aaKnown RBP6.11□□□□□ -1.43
GYPB-206ENST00000506516 CEACAM21Q3KPI0 293 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 TMEM244Q5VVB8 128 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 PRAMEF6Q5VXH4 476 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 TMPRSS11AQ6ZMR5 421 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 MOB3CQ70IA8 216 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 KRT74Q7RTS7 529 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 SYS1Q8N2H4 156 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 OR1M1Q8NGA1 313 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 OR5A2Q8NGI9 324 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 OR52I1Q8NGK6 324 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 OR51F2Q8NH61 342 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 CNIH3Q8TBE1 160 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 APH1BQ8WW43 257 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 OR5P3Q8WZ94 311 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 TFAP2CQ92754 450 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 DVL3Q92997 716 aaPredicted RBP6.11□□□□□ -1.43
GYPB-206ENST00000506516 C10orf35Q96D05 121 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 C1orf159Q96HA4 380 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 TMEM80Q96HE8 168 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 SOX7Q9BT81 388 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 PLEKHA1Q9HB21 404 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 TMEM165Q9HC07 324 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 TRIM36Q9NQ86 728 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 ACOXLQ9NUZ1 547 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 C1orf123Q9NWV4 160 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 ERVK13-1Q9NX77 482 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 MYRFQ9Y2G1 1151 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 TRAV38-1A0A0B4J264 116 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 A0A1B0GTI1 187 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 hCG_1807616A0A1W2PRN6 198 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 EFCAB10A6NFE3 127 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 OR5B21A6NL26 309 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 INAFM1C9JVW0 142 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 NDUFA2O43678 99 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 FOXH1O75593 365 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 IGHV2-5P01817 119 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 ISG15P05161 165 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 MSMBP08118 114 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 H2AFB1P0C5Y9 115 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 H2AFB2P0C5Z0 115 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 HNF1AP20823 631 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 CCL1P22362 96 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 PSMB10P40306 273 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 PMELP40967 661 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 DVL1P1P54792 670 aaPredicted RBP6.1□□□□□ -1.43
GYPB-206ENST00000506516 GNG3P63215 75 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 KRTAP1-1Q07627 177 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 RIPK1Q13546 671 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 ALKBH1Q13686 389 aaKnown RBP6.1□□□□□ -1.43
GYPB-206ENST00000506516 ZMYND11Q15326 602 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 ODF4Q2M2E3 257 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 FAM76BQ5HYJ3 339 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 WDR38Q5JTN6 314 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 CLVS2Q5SYC1 327 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 PLCXD3Q63HM9 321 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 Q6ZSR3 168 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 GLCCI1Q86VQ1 547 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 PRSS35Q8N3Z0 413 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 STX19Q8N4C7 294 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 ZNF676Q8N7Q3 588 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 BOLLQ8N9W6 283 aaKnown RBP6.1□□□□□ -1.43
GYPB-206ENST00000506516 OR14K1Q8NGZ2 314 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 OR2G2Q8NGZ5 317 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 ZNF671Q8TAW3 534 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 C4orf36Q96KX1 117 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 JAM3Q9BX67 310 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 BEX2Q9BXY8 128 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 PATZ1Q9HBE1 687 aaKnown RBP6.1□□□□□ -1.43
GYPB-206ENST00000506516 PLCXD1Q9NUJ7 323 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 TMEM160Q9NX00 188 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 DCAF16Q9NXF7 216 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 CNOT2Q9NZN8 540 aaKnown RBP6.1□□□□□ -1.43
GYPB-206ENST00000506516 LPAR3Q9UBY5 353 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 MIOXQ9UGB7 285 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 CDC42EP3Q9UKI2 254 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 DIMT1Q9UNQ2 313 aaKnown RBP6.1□□□□□ -1.43
GYPB-206ENST00000506516 SLC7A11Q9UPY5 501 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 EXOSC1Q9Y3B2 195 aaKnown RBP6.1□□□□□ -1.43
GYPB-206ENST00000506516 V9GYS6 101 aa6.1□□□□□ -1.43
GYPB-206ENST00000506516 RTTNQ86VV8 2226 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 TRAV20A0A0B4J274 112 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 TRBV2A0A0J9YWF9 115 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 OOEPA6NGQ2 149 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 A6NIN4 97 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 CEACAM18A8MTB9 384 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 ZNF732B4DXR9 585 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 FAM157AC9JC47 383 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 LGALS8O00214 317 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 CDIPTO14735 213 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 PLPP2O43688 288 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 GATBO75879 557 aaKnown RBP6.09□□□□□ -1.43
GYPB-206ENST00000506516 ZNF205O95201 554 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 ATP6V1G2O95670 118 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 LHBP01229 141 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 GNAO1P09471 354 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 WNT2P09544 360 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 CCDC159P0C7I6 412 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 PIPP12273 146 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms