RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 CSNK2BP67870 215 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 ODF4Q2M2E3 257 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 CEP78Q5JTW2 689 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 TMEM244Q5VVB8 128 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 FDX2Q6P4F2 183 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 WDR82Q6UXN9 313 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 BOLLQ8N9W6 283 aaKnown RBP13.98□□□□□ -0.17
SNCA-209ENST00000506244 OR52I1Q8NGK6 324 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 OR10Z1Q8NGY1 313 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 OR14K1Q8NGZ2 314 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 OR2G2Q8NGZ5 317 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 CNIH3Q8TBE1 160 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 PPP1R14AQ96A00 147 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 C10orf35Q96D05 121 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 TECTBQ96PL2 329 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 ERVK13-1Q9NX77 482 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 OR5V1Q9UGF6 321 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 H0YJX3 145 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 GATBO75879 557 aaKnown RBP13.97□□□□□ -0.17
SNCA-209ENST00000506244 IFNA2P01563 188 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 MUC1P15941 1255 aaPredicted RBP13.97□□□□□ -0.17
SNCA-209ENST00000506244 MYL12AP19105 171 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 THBS2P35442 1172 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 PSMB10P40306 273 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 GNB2P62879 340 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 LCN2P80188 198 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 SCGB2A2Q13296 93 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 SMN1Q16637 294 aaKnown RBP13.97□□□□□ -0.17
SNCA-209ENST00000506244 KRTAP21-3Q3LHN1 58 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 FAM76BQ5HYJ3 339 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 FAM201AQ5SY85 155 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 DCAF12L2Q5VW00 463 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 TMEM42Q69YG0 159 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 ZNF826PQ6ZT77 177 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 MOB3CQ70IA8 216 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 LHFPL3Q86UP9 236 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 PRSS35Q8N3Z0 413 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 GCSAMQ8N6F7 178 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 PELI1Q96FA3 418 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 SSBP3Q9BWW4 388 aaPredicted RBP13.97□□□□□ -0.17
SNCA-209ENST00000506244 PPP1R3EQ9H7J1 279 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 FGF20Q9NP95 211 aaPredicted RBP13.97□□□□□ -0.17
SNCA-209ENST00000506244 NKX1-2Q9UD57 310 aaPredicted RBP13.97□□□□□ -0.17
SNCA-209ENST00000506244 MYRFQ9Y2G1 1151 aa13.97□□□□□ -0.17
SNCA-209ENST00000506244 POLR3KQ9Y2Y1 108 aaPredicted RBP13.97□□□□□ -0.17
SNCA-209ENST00000506244 ANKRD61A6NGH8 418 aa13.96□□□□□ -0.17
SNCA-209ENST00000506244 ZNF732B4DXR9 585 aa13.96□□□□□ -0.17
SNCA-209ENST00000506244 C3orf80F5H4A9 247 aa13.96□□□□□ -0.17
SNCA-209ENST00000506244 CDIPTO14735 213 aa13.96□□□□□ -0.17
SNCA-209ENST00000506244 LHBP01229 141 aa13.96□□□□□ -0.17
SNCA-209ENST00000506244 ISG15P05161 165 aa13.96□□□□□ -0.17
SNCA-209ENST00000506244 WNT2P09544 360 aa13.96□□□□□ -0.17
SNCA-209ENST00000506244 CCDC159P0C7I6 412 aa13.96□□□□□ -0.17
SNCA-209ENST00000506244 SRP14P37108 136 aaKnown RBP13.96□□□□□ -0.17
SNCA-209ENST00000506244 RBMXP38159 391 aaKnown RBP13.96□□□□□ -0.17
SNCA-209ENST00000506244 KIR3DL2P43630 455 aa13.96□□□□□ -0.17
SNCA-209ENST00000506244 PITPNBP48739 271 aa13.96□□□□□ -0.17
SNCA-209ENST00000506244 NPY4RP50391 375 aa13.96□□□□□ -0.17
SNCA-209ENST00000506244 MICBQ29980 383 aa13.96□□□□□ -0.17
SNCA-209ENST00000506244 TEX36Q5VZQ5 186 aa13.96□□□□□ -0.17
SNCA-209ENST00000506244 FAHD2BQ6P2I3 314 aaPredicted RBP13.96□□□□□ -0.17
SNCA-209ENST00000506244 DEFB108BQ8NET1 73 aa13.96□□□□□ -0.17
SNCA-209ENST00000506244 PP6455Q8WZ26 134 aa13.96□□□□□ -0.17
SNCA-209ENST00000506244 C12orf43Q96C57 262 aaKnown RBP13.96□□□□□ -0.17
SNCA-209ENST00000506244 FAHD2AQ96GK7 314 aa13.96□□□□□ -0.17
SNCA-209ENST00000506244 CHCHD3Q9NX63 227 aaKnown RBP13.96□□□□□ -0.17
SNCA-209ENST00000506244 CLN8Q9UBY8 286 aa13.96□□□□□ -0.17
SNCA-209ENST00000506244 SRRM5B3KS81 715 aa13.95□□□□□ -0.18
SNCA-209ENST00000506244 SERPINA3P01011 423 aa13.95□□□□□ -0.18
SNCA-209ENST00000506244 GBX2P52951 348 aaPredicted RBP13.95□□□□□ -0.18
SNCA-209ENST00000506244 ALKBH1Q13686 389 aaKnown RBP13.95□□□□□ -0.18
SNCA-209ENST00000506244 SFRP4Q6FHJ7 346 aaPredicted RBP13.95□□□□□ -0.18
SNCA-209ENST00000506244 TMPRSS11AQ6ZMR5 421 aa13.95□□□□□ -0.18
SNCA-209ENST00000506244 ZNF573Q86YE8 665 aa13.95□□□□□ -0.18
SNCA-209ENST00000506244 C11orf53Q8IXP5 236 aa13.95□□□□□ -0.18
SNCA-209ENST00000506244 ZNF676Q8N7Q3 588 aa13.95□□□□□ -0.18
SNCA-209ENST00000506244 SCCPDHQ8NBX0 429 aa13.95□□□□□ -0.18
SNCA-209ENST00000506244 RPL3LQ92901 407 aaKnown RBP13.95□□□□□ -0.18
SNCA-209ENST00000506244 CHST5Q9GZS9 411 aa13.95□□□□□ -0.18
SNCA-209ENST00000506244 COMMD4Q9H0A8 199 aa13.95□□□□□ -0.18
SNCA-209ENST00000506244 OR51I2Q9H344 312 aa13.95□□□□□ -0.18
SNCA-209ENST00000506244 GPR173Q9NS66 373 aa13.95□□□□□ -0.18
SNCA-209ENST00000506244 FRRS1LQ9P0K9 344 aa13.95□□□□□ -0.18
SNCA-209ENST00000506244 DNAJB11Q9UBS4 358 aa13.95□□□□□ -0.18
SNCA-209ENST00000506244 HHLA2Q9UM44 414 aa13.95□□□□□ -0.18
SNCA-209ENST00000506244 DIMT1Q9UNQ2 313 aaKnown RBP13.95□□□□□ -0.18
SNCA-209ENST00000506244 SLC7A11Q9UPY5 501 aa13.95□□□□□ -0.18
SNCA-209ENST00000506244 POLDIP2Q9Y2S7 368 aa13.95□□□□□ -0.18
SNCA-209ENST00000506244 EXOSC1Q9Y3B2 195 aaKnown RBP13.95□□□□□ -0.18
SNCA-209ENST00000506244 EFCAB10A6NFE3 127 aa13.94□□□□□ -0.18
SNCA-209ENST00000506244 TMEM212A6NML5 194 aa13.94□□□□□ -0.18
SNCA-209ENST00000506244 GNAO1P09471 354 aa13.94□□□□□ -0.18
SNCA-209ENST00000506244 PIPP12273 146 aaPredicted RBP13.94□□□□□ -0.18
SNCA-209ENST00000506244 ZNF20P17024 532 aa13.94□□□□□ -0.18
SNCA-209ENST00000506244 NANOS3P60323 173 aaKnown RBP13.94□□□□□ -0.18
SNCA-209ENST00000506244 SEC61A1P61619 476 aaKnown RBP13.94□□□□□ -0.18
SNCA-209ENST00000506244 CNN3Q15417 329 aaKnown RBP13.94□□□□□ -0.18
SNCA-209ENST00000506244 IL17RELQ6ZVW7 336 aa13.94□□□□□ -0.18
SNCA-209ENST00000506244 FAM90A1Q86YD7 464 aa13.94□□□□□ -0.18
SNCA-209ENST00000506244 C19orf18Q8NEA5 215 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms