RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 JAGN1Q8N5M9 183 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 CSNK2A3Q8NEV1 391 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 OR5L1Q8NGL2 311 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 S100ZQ8WXG8 99 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 RFT1Q96AA3 541 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 MUCL1Q96DR8 90 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 CMTM3Q96MX0 182 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 ABCG5Q9H222 651 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 MRPL15Q9P015 296 aaKnown RBP8.88□□□□□ -0.99
TPM3-217ENST00000504663 MYEF2Q9P2K5 600 aaKnown RBP8.88□□□□□ -0.99
TPM3-217ENST00000504663 KCNN3Q9UGI6 736 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 ETV7Q9Y603 341 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 HRNRQ86YZ3 2850 aaPredicted RBP8.88□□□□□ -0.99
TPM3-217ENST00000504663 USP9XQ93008 2570 aaPredicted RBP8.88□□□□□ -0.99
TPM3-217ENST00000504663 FLNCQ14315 2725 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 LOC100289279A0A1B0GTE1 492 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 A0A1W2PP11 408 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 GGT3PA6NGU5 568 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 FOXI3A8MTJ6 420 aaPredicted RBP8.87□□□□□ -0.99
TPM3-217ENST00000504663 RGS5O15539 181 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 ZG16O60844 167 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 KDM4BO94953 1096 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 IGFBP2P18065 325 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 AGAP20933 346 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 TUBG1P23258 451 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 GLRXP35754 106 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 PEX19P40855 299 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 BSPH1Q075Z2 132 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 ZNF846Q147U1 533 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 CNN3Q15417 329 aaKnown RBP8.87□□□□□ -0.99
TPM3-217ENST00000504663 NCMAPQ5T1S8 102 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 OR10K2Q6IF99 312 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 MZT2AQ6P582 158 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 MOB3CQ70IA8 216 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 RTN4RL2Q86UN3 420 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 CALHM1Q8IU99 346 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 ACBD4Q8NC06 268 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 TMEM104Q8NE00 496 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 NUP37Q8NFH4 326 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 OR5P3Q8WZ94 311 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 PIGCQ92535 297 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 GTF3AQ92664 365 aaKnown RBP8.87□□□□□ -0.99
TPM3-217ENST00000504663 FOXRED1Q96CU9 486 aaPredicted RBP8.87□□□□□ -0.99
TPM3-217ENST00000504663 ANAPC16Q96DE5 110 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 ZC3HAV1LQ96H79 300 aaKnown RBP8.87□□□□□ -0.99
TPM3-217ENST00000504663 SORCS2Q96PQ0 1159 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 MRI1Q9BV20 369 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 BCL2L14Q9BZR8 327 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 WDR12Q9GZL7 423 aaKnown RBP8.87□□□□□ -0.99
TPM3-217ENST00000504663 PLGRKTQ9HBL7 147 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 TUBG2Q9NRH3 451 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 RHBDL2Q9NX52 303 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 COQ3Q9NZJ6 369 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 EIF3KQ9UBQ5 218 aaKnown RBP8.87□□□□□ -0.99
TPM3-217ENST00000504663 PURGQ9UJV8 347 aaKnown RBP8.87□□□□□ -0.99
TPM3-217ENST00000504663 CHD6Q8TD26 2715 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 DOPEY1Q5JWR5 2465 aa8.87□□□□□ -0.99
TPM3-217ENST00000504663 RAI1Q7Z5J4 1906 aaPredicted RBP8.86□□□□□ -0.99
TPM3-217ENST00000504663 DEFB108AA8MXU0 73 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 SHISA9B4DS77 424 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 H0YL77 283 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 C19orf84I3L1E1 186 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 CTAG2O75638 210 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 BPNT1O95861 308 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 ERCC1P07992 297 aaPredicted RBP8.86□□□□□ -0.99
TPM3-217ENST00000504663 HCKP08631 526 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 PRKACBP22694 351 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 S100A5P33763 92 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 MNDAP41218 407 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 RAD52P43351 418 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 PTH2RP49190 550 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 PPP5CP53041 499 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 ZNF45Q02386 682 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 SRSF1Q07955 248 aaKnown RBP eCLIP8.86□□□□□ -0.99
TPM3-217ENST00000504663 MADCAM1Q13477 382 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 CEACAM21Q3KPI0 293 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 MOGAT2Q3SYC2 334 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 PLCXD3Q63HM9 321 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 METAP1DQ6UB28 335 aaPredicted RBP8.86□□□□□ -0.99
TPM3-217ENST00000504663 DNM1P46Q6ZS02 220 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 LHFPL2Q6ZUX7 228 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 SSX8Q7RTT4 187 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 ZDHHC23Q8IYP9 409 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 ZNF808Q8N4W9 903 aaPredicted RBP8.86□□□□□ -0.99
TPM3-217ENST00000504663 DTX3Q8N9I9 347 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 BHLHE23Q8NDY6 225 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 OR5D18Q8NGL1 313 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 ZNF671Q8TAW3 534 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 LINC01560Q8TB33 94 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 SYNPRQ8TBG9 265 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 PTX4Q96A99 478 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 TECTBQ96PL2 329 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 ABHD1Q96SE0 405 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 SPOCK3Q9BQ16 436 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 PAPOLGQ9BWT3 736 aaKnown RBP8.86□□□□□ -0.99
TPM3-217ENST00000504663 HMG20AQ9NP66 347 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 EXTL2Q9UBQ6 330 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 FZR1Q9UM11 496 aa8.86□□□□□ -0.99
TPM3-217ENST00000504663 MRPS28Q9Y2Q9 187 aaKnown RBP8.86□□□□□ -0.99
TPM3-217ENST00000504663 MPC1Q9Y5U8 109 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms