RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 G6PC2Q9NQR9 355 aa15.23■□□□□ 0.03
SQSTM1-209ENST00000504627 FRRS1LQ9P0K9 344 aa15.23■□□□□ 0.03
SQSTM1-209ENST00000504627 NUFIP1Q9UHK0 495 aaKnown RBP15.23■□□□□ 0.03
SQSTM1-209ENST00000504627 OR52A1Q9UKL2 312 aa15.23■□□□□ 0.03
SQSTM1-209ENST00000504627 SSR3Q9UNL2 185 aa15.23■□□□□ 0.03
SQSTM1-209ENST00000504627 ZNF281Q9Y2X9 895 aa15.23■□□□□ 0.03
SQSTM1-209ENST00000504627 STARD10Q9Y365 291 aa15.23■□□□□ 0.03
SQSTM1-209ENST00000504627 FBN3Q75N90 2809 aa15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 TRDV1A0A1B0GX56 115 aa15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 H3BMQ9 156 aa15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 SLC22A1O15245 554 aa15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 ZFPL1O95159 310 aa15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 PNPP00491 289 aa15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 SERPINA3P01011 423 aa15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 UBCP0CG48 685 aaKnown RBP15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 PRKXP51817 358 aa15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 TPTEP56180 551 aa15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 ZNF121P58317 390 aaPredicted RBP15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 SCGB2A2Q13296 93 aa15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 OR5AK2Q8NH90 309 aa15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 SLC7A6Q92536 515 aa15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 THRSPQ92748 146 aa15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 C12orf43Q96C57 262 aaKnown RBP15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 CMBLQ96DG6 245 aa15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 DCLRE1CQ96SD1 692 aaKnown RBP15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 PDCD1LG2Q9BQ51 273 aa15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 CHCHD6Q9BRQ6 235 aa15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 OR51E2Q9H255 320 aa15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 POFUT1Q9H488 388 aa15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 PURGQ9UJV8 347 aaKnown RBP15.22■□□□□ 0.03
SQSTM1-209ENST00000504627 GPX5O75715 221 aa15.21■□□□□ 0.03
SQSTM1-209ENST00000504627 IGHV2-5P01817 119 aa15.21■□□□□ 0.03
SQSTM1-209ENST00000504627 CD55P08174 381 aa15.21■□□□□ 0.03
SQSTM1-209ENST00000504627 TNFRSF1AP19438 455 aa15.21■□□□□ 0.03
SQSTM1-209ENST00000504627 FGF9P31371 208 aaPredicted RBP15.21■□□□□ 0.03
SQSTM1-209ENST00000504627 SLC6A9P48067 706 aa15.21■□□□□ 0.03
SQSTM1-209ENST00000504627 ELMOD2Q8IZ81 293 aa15.21■□□□□ 0.03
SQSTM1-209ENST00000504627 TEX29Q8N6K0 151 aa15.21■□□□□ 0.03
SQSTM1-209ENST00000504627 ZNF676Q8N7Q3 588 aa15.21■□□□□ 0.03
SQSTM1-209ENST00000504627 OR2Z1Q8NG97 314 aa15.21■□□□□ 0.03
SQSTM1-209ENST00000504627 RPL3LQ92901 407 aaKnown RBP15.21■□□□□ 0.03
SQSTM1-209ENST00000504627 TMEM203Q969S6 136 aa15.21■□□□□ 0.03
SQSTM1-209ENST00000504627 PBOV1Q9GZY1 135 aa15.21■□□□□ 0.03
SQSTM1-209ENST00000504627 SP140LQ9H930 580 aa15.21■□□□□ 0.03
SQSTM1-209ENST00000504627 EXOSC4Q9NPD3 245 aaKnown RBP15.21■□□□□ 0.03
SQSTM1-209ENST00000504627 GTF2A1LQ9UNN4 478 aa15.21■□□□□ 0.03
SQSTM1-209ENST00000504627 A0A0G2JMP0 313 aa15.2■□□□□ 0.02
SQSTM1-209ENST00000504627 LOC100506127A0A0U1RQW1 187 aa15.2■□□□□ 0.02
SQSTM1-209ENST00000504627 A0A0X1KG70 313 aa15.2■□□□□ 0.02
SQSTM1-209ENST00000504627 F5H5K5 113 aa15.2■□□□□ 0.02
SQSTM1-209ENST00000504627 GABRPO00591 440 aa15.2■□□□□ 0.02
SQSTM1-209ENST00000504627 SC5DO75845 299 aa15.2■□□□□ 0.02
SQSTM1-209ENST00000504627 ISG15P05161 165 aa15.2■□□□□ 0.02
SQSTM1-209ENST00000504627 ANXA2P07355 339 aaKnown RBP15.2■□□□□ 0.02
SQSTM1-209ENST00000504627 ACSM4P0C7M7 580 aa15.2■□□□□ 0.02
SQSTM1-209ENST00000504627 KITLGP21583 273 aa15.2■□□□□ 0.02
SQSTM1-209ENST00000504627 FABP5Q01469 135 aa15.2■□□□□ 0.02
SQSTM1-209ENST00000504627 PRSS45Q7RTY3 260 aa15.2■□□□□ 0.02
SQSTM1-209ENST00000504627 OR4M2Q8NGB6 313 aa15.2■□□□□ 0.02
SQSTM1-209ENST00000504627 OR8B12Q8NGG6 310 aa15.2■□□□□ 0.02
SQSTM1-209ENST00000504627 OR52H1Q8NGJ2 320 aa15.2■□□□□ 0.02
SQSTM1-209ENST00000504627 OR5L1Q8NGL2 311 aa15.2■□□□□ 0.02
SQSTM1-209ENST00000504627 RGP1Q92546 391 aaPredicted RBP15.2■□□□□ 0.02
SQSTM1-209ENST00000504627 PHYHIPQ92561 330 aa15.2■□□□□ 0.02
SQSTM1-209ENST00000504627 HAVCR1Q96D42 359 aa15.2■□□□□ 0.02
SQSTM1-209ENST00000504627 GSTK1Q9Y2Q3 226 aa15.2■□□□□ 0.02
SQSTM1-209ENST00000504627 GATBO75879 557 aaKnown RBP15.19■□□□□ 0.02
SQSTM1-209ENST00000504627 TTRP02766 147 aa15.19■□□□□ 0.02
SQSTM1-209ENST00000504627 DBHP09172 617 aa15.19■□□□□ 0.02
SQSTM1-209ENST00000504627 MAPK3P27361 379 aaPredicted RBP15.19■□□□□ 0.02
SQSTM1-209ENST00000504627 RPS11P62280 158 aaKnown RBP eCLIP15.19■□□□□ 0.02
SQSTM1-209ENST00000504627 RSPO1Q2MKA7 263 aaPredicted RBP15.19■□□□□ 0.02
SQSTM1-209ENST00000504627 SPRNQ5BIV9 151 aa15.19■□□□□ 0.02
SQSTM1-209ENST00000504627 TMEM244Q5VVB8 128 aa15.19■□□□□ 0.02
SQSTM1-209ENST00000504627 DCAF12L2Q5VW00 463 aa15.19■□□□□ 0.02
SQSTM1-209ENST00000504627 GPR148Q8TDV2 347 aa15.19■□□□□ 0.02
SQSTM1-209ENST00000504627 CENPOQ9BU64 300 aa15.19■□□□□ 0.02
SQSTM1-209ENST00000504627 TXNL4BQ9NX01 149 aaKnown RBP15.19■□□□□ 0.02
SQSTM1-209ENST00000504627 PTTG3PQ9NZH4 202 aa15.19■□□□□ 0.02
SQSTM1-209ENST00000504627 PCDHB10Q9UN67 800 aa15.19■□□□□ 0.02
SQSTM1-209ENST00000504627 SLC22A13Q9Y226 551 aa15.19■□□□□ 0.02
SQSTM1-209ENST00000504627 NPTNQ9Y639 398 aa15.19■□□□□ 0.02
SQSTM1-209ENST00000504627 TRBV5-5A0A0J9YX44 114 aa15.18■□□□□ 0.02
SQSTM1-209ENST00000504627 A0A0U1RQV5 110 aa15.18■□□□□ 0.02
SQSTM1-209ENST00000504627 LOC107986453A0A1B0GWG9 222 aa15.18■□□□□ 0.02
SQSTM1-209ENST00000504627 J3QW42 95 aa15.18■□□□□ 0.02
SQSTM1-209ENST00000504627 SLC2A1P11166 492 aa15.18■□□□□ 0.02
SQSTM1-209ENST00000504627 RAC2P15153 192 aa15.18■□□□□ 0.02
SQSTM1-209ENST00000504627 NCS1P62166 190 aa15.18■□□□□ 0.02
SQSTM1-209ENST00000504627 Q499Y3 187 aa15.18■□□□□ 0.02
SQSTM1-209ENST00000504627 FAM57BQ71RH2 274 aa15.18■□□□□ 0.02
SQSTM1-209ENST00000504627 OR5AS1Q8N127 324 aa15.18■□□□□ 0.02
SQSTM1-209ENST00000504627 APOBEC3DQ96AK3 386 aaPredicted RBP15.18■□□□□ 0.02
SQSTM1-209ENST00000504627 PGAM5Q96HS1 289 aa15.18■□□□□ 0.02
SQSTM1-209ENST00000504627 OR10A2Q9H208 303 aa15.18■□□□□ 0.02
SQSTM1-209ENST00000504627 BRD7Q9NPI1 651 aa15.18■□□□□ 0.02
SQSTM1-209ENST00000504627 TMEM106BQ9NUM4 274 aa15.18■□□□□ 0.02
SQSTM1-209ENST00000504627 IL19Q9UHD0 177 aa15.18■□□□□ 0.02
SQSTM1-209ENST00000504627 ZNF391Q9UJN7 358 aa15.18■□□□□ 0.02
SQSTM1-209ENST00000504627 HHLA2Q9UM44 414 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms