RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 Q6ZSR3 168 aa17.63■□□□□ 0.41
TRAPPC11-203ENST00000504526 SCCPDHQ8NBX0 429 aa17.63■□□□□ 0.41
TRAPPC11-203ENST00000504526 CCDC54Q8NEL0 328 aa17.63■□□□□ 0.41
TRAPPC11-203ENST00000504526 RPL3LQ92901 407 aaKnown RBP17.63■□□□□ 0.41
TRAPPC11-203ENST00000504526 RNFT2Q96EX2 444 aa17.63■□□□□ 0.41
TRAPPC11-203ENST00000504526 Q96MT0 163 aa17.63■□□□□ 0.41
TRAPPC11-203ENST00000504526 RDH12Q96NR8 316 aa17.63■□□□□ 0.41
TRAPPC11-203ENST00000504526 MYCBPQ99417 103 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC11-203ENST00000504526 NUDT16L1Q9BRJ7 211 aaKnown RBP17.63■□□□□ 0.41
TRAPPC11-203ENST00000504526 CTSZQ9UBR2 303 aa17.63■□□□□ 0.41
TRAPPC11-203ENST00000504526 V9GYS6 101 aa17.63■□□□□ 0.41
TRAPPC11-203ENST00000504526 ARHGAP32A7KAX9 2087 aa17.63■□□□□ 0.41
TRAPPC11-203ENST00000504526 ZNF732B4DXR9 585 aa17.62■□□□□ 0.41
TRAPPC11-203ENST00000504526 NRASP01111 189 aa17.62■□□□□ 0.41
TRAPPC11-203ENST00000504526 CCL1P22362 96 aa17.62■□□□□ 0.41
TRAPPC11-203ENST00000504526 GPM6AP51674 278 aa17.62■□□□□ 0.41
TRAPPC11-203ENST00000504526 ZNF85Q03923 595 aa17.62■□□□□ 0.41
TRAPPC11-203ENST00000504526 CLVS2Q5SYC1 327 aa17.62■□□□□ 0.41
TRAPPC11-203ENST00000504526 PLCXD3Q63HM9 321 aa17.62■□□□□ 0.41
TRAPPC11-203ENST00000504526 MOB3CQ70IA8 216 aa17.62■□□□□ 0.41
TRAPPC11-203ENST00000504526 KCTD20Q7Z5Y7 419 aa17.62■□□□□ 0.41
TRAPPC11-203ENST00000504526 CATSPERDQ86XM0 798 aa17.62■□□□□ 0.41
TRAPPC11-203ENST00000504526 PHC2Q8IXK0 858 aa17.62■□□□□ 0.41
TRAPPC11-203ENST00000504526 BPIFB2Q8N4F0 458 aa17.62■□□□□ 0.41
TRAPPC11-203ENST00000504526 OR14K1Q8NGZ2 314 aa17.62■□□□□ 0.41
TRAPPC11-203ENST00000504526 JMJD8Q96S16 334 aa17.62■□□□□ 0.41
TRAPPC11-203ENST00000504526 SUCNR1Q9BXA5 334 aa17.62■□□□□ 0.41
TRAPPC11-203ENST00000504526 FGF23Q9GZV9 251 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC11-203ENST00000504526 OR51I2Q9H344 312 aa17.62■□□□□ 0.41
TRAPPC11-203ENST00000504526 NUP50Q9UKX7 468 aa17.62■□□□□ 0.41
TRAPPC11-203ENST00000504526 SLC22A13Q9Y226 551 aa17.62■□□□□ 0.41
TRAPPC11-203ENST00000504526 SVEP1Q4LDE5 3571 aa17.61■□□□□ 0.41
TRAPPC11-203ENST00000504526 IGHV3OR15-7A0A075B7D8 119 aa17.61■□□□□ 0.41
TRAPPC11-203ENST00000504526 A0A1B0GTI1 187 aa17.61■□□□□ 0.41
TRAPPC11-203ENST00000504526 LOC100130705A0A1B0GUX0 176 aa17.61■□□□□ 0.41
TRAPPC11-203ENST00000504526 A0A1B0GVI7 797 aa17.61■□□□□ 0.41
TRAPPC11-203ENST00000504526 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC11-203ENST00000504526 P2RY10O00398 339 aa17.61■□□□□ 0.41
TRAPPC11-203ENST00000504526 DLGAP1O14490 977 aa17.61■□□□□ 0.41
TRAPPC11-203ENST00000504526 TMPRSS2O15393 492 aa17.61■□□□□ 0.41
TRAPPC11-203ENST00000504526 ECDO95905 644 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC11-203ENST00000504526 LIPFP07098 398 aa17.61■□□□□ 0.41
TRAPPC11-203ENST00000504526 CEP78Q5JTW2 689 aa17.61■□□□□ 0.41
TRAPPC11-203ENST00000504526 SLC36A1Q7Z2H8 476 aa17.61■□□□□ 0.41
TRAPPC11-203ENST00000504526 ZNF671Q8TAW3 534 aa17.61■□□□□ 0.41
TRAPPC11-203ENST00000504526 RORBQ92753 470 aa17.61■□□□□ 0.41
TRAPPC11-203ENST00000504526 MRPL48Q96GC5 212 aaKnown RBP17.61■□□□□ 0.41
TRAPPC11-203ENST00000504526 DNTTIP1Q9H147 329 aa17.61■□□□□ 0.41
TRAPPC11-203ENST00000504526 DNAJB11Q9UBS4 358 aa17.61■□□□□ 0.41
TRAPPC11-203ENST00000504526 GNG8Q9UK08 70 aa17.61■□□□□ 0.41
TRAPPC11-203ENST00000504526 DAPL1A0PJW8 107 aa17.6■□□□□ 0.41
TRAPPC11-203ENST00000504526 J3QRE1 110 aa17.6■□□□□ 0.41
TRAPPC11-203ENST00000504526 SLC16A6O15403 523 aa17.6■□□□□ 0.41
TRAPPC11-203ENST00000504526 GABRB1P18505 474 aa17.6■□□□□ 0.41
TRAPPC11-203ENST00000504526 ISL1P61371 349 aa17.6■□□□□ 0.41
TRAPPC11-203ENST00000504526 ATPAF1Q5TC12 328 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC11-203ENST00000504526 TMEM42Q69YG0 159 aa17.6■□□□□ 0.41
TRAPPC11-203ENST00000504526 ENTHD1Q8IYW4 607 aa17.6■□□□□ 0.41
TRAPPC11-203ENST00000504526 ACBD7Q8N6N7 88 aa17.6■□□□□ 0.41
TRAPPC11-203ENST00000504526 RHOXF1Q8NHV9 184 aa17.6■□□□□ 0.41
TRAPPC11-203ENST00000504526 ZFAND2BQ8WV99 257 aa17.6■□□□□ 0.41
TRAPPC11-203ENST00000504526 UPRTQ96BW1 309 aa17.6■□□□□ 0.41
TRAPPC11-203ENST00000504526 ADI1Q9BV57 179 aa17.6■□□□□ 0.41
TRAPPC11-203ENST00000504526 C8orf4Q9NR00 106 aa17.6■□□□□ 0.41
TRAPPC11-203ENST00000504526 FAM118AQ9NWS6 357 aa17.6■□□□□ 0.41
TRAPPC11-203ENST00000504526 SMPD3Q9NY59 655 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC11-203ENST00000504526 EXOGQ9Y2C4 368 aaKnown RBP17.6■□□□□ 0.41
TRAPPC11-203ENST00000504526 DVL1O14640 695 aa17.59■□□□□ 0.41
TRAPPC11-203ENST00000504526 GPR37O15354 613 aa17.59■□□□□ 0.41
TRAPPC11-203ENST00000504526 SYT7O43581 403 aa17.59■□□□□ 0.41
TRAPPC11-203ENST00000504526 HILS1P60008 231 aa17.59■□□□□ 0.41
TRAPPC11-203ENST00000504526 SRSF2Q01130 221 aaKnown RBP17.59■□□□□ 0.41
TRAPPC11-203ENST00000504526 CDONQ4KMG0 1287 aa17.59■□□□□ 0.41
TRAPPC11-203ENST00000504526 WDR38Q5JTN6 314 aa17.59■□□□□ 0.41
TRAPPC11-203ENST00000504526 EGFL6Q8IUX8 553 aa17.59■□□□□ 0.41
TRAPPC11-203ENST00000504526 PNLDC1Q8NA58 520 aaKnown RBP17.59■□□□□ 0.41
TRAPPC11-203ENST00000504526 ZNF555Q8NEP9 628 aa17.59■□□□□ 0.41
TRAPPC11-203ENST00000504526 C19orf24Q9BVV8 132 aa17.59■□□□□ 0.41
TRAPPC11-203ENST00000504526 PLEKHA1Q9HB21 404 aa17.59■□□□□ 0.41
TRAPPC11-203ENST00000504526 SMURF1Q9HCE7 757 aa17.59■□□□□ 0.41
TRAPPC11-203ENST00000504526 ACOXLQ9NUZ1 547 aa17.59■□□□□ 0.41
TRAPPC11-203ENST00000504526 CUBNO60494 3623 aa17.59■□□□□ 0.41
TRAPPC11-203ENST00000504526 NKX6-3A6NJ46 265 aa17.58■□□□□ 0.4
TRAPPC11-203ENST00000504526 C22orf46C9J442 243 aa17.58■□□□□ 0.4
TRAPPC11-203ENST00000504526 AKR7A2O43488 359 aa17.58■□□□□ 0.4
TRAPPC11-203ENST00000504526 UBCP0CG48 685 aaKnown RBP17.58■□□□□ 0.4
TRAPPC11-203ENST00000504526 ACTA2P62736 377 aa17.58■□□□□ 0.4
TRAPPC11-203ENST00000504526 ACTG2P63267 376 aa17.58■□□□□ 0.4
TRAPPC11-203ENST00000504526 ZNF91Q05481 1191 aa17.58■□□□□ 0.4
TRAPPC11-203ENST00000504526 TP53I3Q53FA7 332 aa17.58■□□□□ 0.4
TRAPPC11-203ENST00000504526 KLF17Q5JT82 389 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC11-203ENST00000504526 STUMQ69YW2 141 aa17.58■□□□□ 0.4
TRAPPC11-203ENST00000504526 ZNF573Q86YE8 665 aa17.58■□□□□ 0.4
TRAPPC11-203ENST00000504526 AQP3Q92482 292 aa17.58■□□□□ 0.4
TRAPPC11-203ENST00000504526 C10orf35Q96D05 121 aa17.58■□□□□ 0.4
TRAPPC11-203ENST00000504526 CCL13Q99616 98 aa17.58■□□□□ 0.4
TRAPPC11-203ENST00000504526 VENTXO95231 258 aa17.57■□□□□ 0.4
TRAPPC11-203ENST00000504526 FADS2O95864 444 aaKnown RBP17.57■□□□□ 0.4
TRAPPC11-203ENST00000504526 DBTP11182 482 aaKnown RBP17.57■□□□□ 0.4
TRAPPC11-203ENST00000504526 GLRA1P23415 457 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms